RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 ZSCAN5BA6NJL1 495 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 RNF212BA8MTL3 300 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 SRRM5B3KS81 715 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 CA7P43166 264 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 OR3A1P47881 315 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 FAM27E3Q08E93 113 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 TESK1Q15569 626 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 LRP11Q86VZ4 500 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 FAM219AQ8IW50 185 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 CLEC18CQ8NCF0 446 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 GALNT11Q8NCW6 608 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 OR52M1Q8NGK5 317 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 RNF141Q8WVD5 230 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 LIN7CQ9NUP9 197 aaKnown RBP15.71■□□□□ 0.11
SPNS3-204ENST00000575194 HIVEP3Q5T1R4 2406 aa15.71■□□□□ 0.11
SPNS3-204ENST00000575194 NKX2-6A6NCS4 301 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 ATP6V1G2-DDX39BF2Z307 99 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 C16orf97H3BN30 126 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 SHOXO15266 292 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 JTBO76095 146 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 HEXAP06865 529 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 SERPINE2P07093 398 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 ZP3P21754 424 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 CD40P25942 277 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 IL2RGP31785 369 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 COL10A1Q03692 680 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 TLE1Q04724 770 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 MSMPQ1L6U9 139 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 TMEM108Q6UXF1 575 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 ZNF843Q8N446 348 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 NUP37Q8NFH4 326 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 PPP1R35Q8TAP8 253 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 MEGF10Q96KG7 1140 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 DMRTA2Q96SC8 542 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 VKORC1Q9BQB6 163 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 KCNS2Q9ULS6 477 aa15.71■□□□□ 0.1
SPNS3-204ENST00000575194 RCL1Q9Y2P8 373 aaKnown RBP15.71■□□□□ 0.1
SPNS3-204ENST00000575194 KRBOX1C9JBD0 128 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 FGF16O43320 207 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 TNFSF12O43508 249 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 C1QL1O75973 258 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 FGF2P09038 288 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 CEACAM6P40199 344 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 NKX2-1P43699 371 aaPredicted RBP15.7■□□□□ 0.1
SPNS3-204ENST00000575194 GABRA2P47869 451 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 KRBOX4Q5JUW0 171 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 VHLLQ6RSH7 139 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 NINJ1Q92982 152 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 OR2V2Q96R30 315 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 OR2S2Q9NQN1 319 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 FBXL17Q9UF56 701 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 SH3BGRL2Q9UJC5 107 aa15.7■□□□□ 0.1
SPNS3-204ENST00000575194 TRGV8A0A0C4DH27 118 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 A8MXK9 166 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 C12orf77C9JDV5 145 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 ADAM20O43506 726 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 SLC25A6P12236 298 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 CASP6P55212 293 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 MSMO1Q15800 293 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 NMSQ5H8A3 153 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 ZBTB34Q8NCN2 500 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 COQ2Q96H96 371 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 LURAP1Q96LR2 239 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 TOLLIPQ9H0E2 274 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 FLNCQ14315 2725 aa15.69■□□□□ 0.1
SPNS3-204ENST00000575194 BORCS7-ASMTA0A0B4J1R7 106 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 MMP9P14780 707 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 TNFSF4P23510 183 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 PTAFRP25105 342 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 PRDX2P32119 198 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 CCKARP32238 428 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 TMEM33P57088 247 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 AESQ08117 197 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 OR51H1Q8NH63 302 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 TMED6Q8WW62 240 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 PLEKHF2Q9H8W4 249 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 BARX1Q9HBU1 254 aaPredicted RBP15.68■□□□□ 0.1
SPNS3-204ENST00000575194 JKAMPQ9P055 326 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 CHD3Q12873 2000 aaKnown RBP15.68■□□□□ 0.1
SPNS3-204ENST00000575194 NUDT19A8MXV4 375 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 GATA4P43694 442 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 RPL7L1Q6DKI1 246 aaKnown RBP15.68■□□□□ 0.1
SPNS3-204ENST00000575194 OR1L1Q8NH94 360 aa15.68■□□□□ 0.1
SPNS3-204ENST00000575194 HEATR1Q9H583 2144 aaKnown RBP15.68■□□□□ 0.1
SPNS3-204ENST00000575194 MYO18BQ8IUG5 2567 aa15.67■□□□□ 0.1
SPNS3-204ENST00000575194 HBZP02008 142 aa15.67■□□□□ 0.1
SPNS3-204ENST00000575194 OR8U9P0C7N5 309 aa15.67■□□□□ 0.1
SPNS3-204ENST00000575194 PSG2P11465 335 aa15.67■□□□□ 0.1
SPNS3-204ENST00000575194 VAMP2P63027 116 aa15.67■□□□□ 0.1
SPNS3-204ENST00000575194 MOGAT3Q86VF5 341 aa15.67■□□□□ 0.1
SPNS3-204ENST00000575194 CD177Q8N6Q3 437 aa15.67■□□□□ 0.1
SPNS3-204ENST00000575194 ZNF645Q8N7E2 425 aa15.67■□□□□ 0.1
SPNS3-204ENST00000575194 UBAC2Q8NBM4 344 aa15.67■□□□□ 0.1
SPNS3-204ENST00000575194 OR8U1Q8NH10 309 aa15.67■□□□□ 0.1
SPNS3-204ENST00000575194 RNASE11Q8TAA1 199 aaKnown RBP15.67■□□□□ 0.1
SPNS3-204ENST00000575194 FAM216AQ8WUB2 273 aa15.67■□□□□ 0.1
SPNS3-204ENST00000575194 LSM10Q969L4 123 aaKnown RBP15.67■□□□□ 0.1
SPNS3-204ENST00000575194 ZDHHC8Q9ULC8 765 aa15.67■□□□□ 0.1
SPNS3-204ENST00000575194 DIDO1Q9BTC0 2240 aaKnown RBP15.66■□□□□ 0.1
SPNS3-204ENST00000575194 A0A1B0GU03 582 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms