RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 CYP2G1PQ6ZSU1 146 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 PRR18Q8N4B5 295 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 OR51G1Q8NGK1 321 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 APH1AQ96BI3 265 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 ANAPC16Q96DE5 110 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 MSI2Q96DH6 328 aaKnown RBP8.26□□□□□ -1.09
CCDC40-212ENST00000574799 WNT5BQ9H1J7 359 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 VSIRQ9H7M9 311 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 FSCN3Q9NQT6 498 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF319Q9P2F9 582 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 ZFP30Q9Y2G7 519 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 CACNA1DQ01668 2161 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 VDAC1P21796 283 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 RPS16P62249 146 aaKnown RBP8.26□□□□□ -1.09
CCDC40-212ENST00000574799 RPL23P62829 140 aaKnown RBP8.26□□□□□ -1.09
CCDC40-212ENST00000574799 GRB2P62993 217 aaKnown RBP8.26□□□□□ -1.09
CCDC40-212ENST00000574799 HTD2P86397 168 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 PIGYQ3MUY2 71 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 ANKRD39Q53RE8 183 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 C16orf47Q6ZP98 133 aaPredicted RBP8.26□□□□□ -1.09
CCDC40-212ENST00000574799 NUFIP2Q7Z417 695 aaKnown RBP8.26□□□□□ -1.09
CCDC40-212ENST00000574799 BOD1L1Q8NFC6 3051 aa8.26□□□□□ -1.09
CCDC40-212ENST00000574799 SRSF10O75494 262 aaKnown RBP8.25□□□□□ -1.09
CCDC40-212ENST00000574799 KBTBD11O94819 623 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 GZMHP20718 246 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 AMTP48728 403 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 ADPRHL1Q8NDY3 354 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 OR2AE1Q8NHA4 323 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 SGMS2Q8NHU3 365 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 PIGCQ92535 297 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF775Q96BV0 537 aaPredicted RBP8.25□□□□□ -1.09
CCDC40-212ENST00000574799 C18orf12Q96KH6 178 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 P2RX4Q99571 388 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 PARD6GQ9BYG4 376 aaPredicted RBP8.25□□□□□ -1.09
CCDC40-212ENST00000574799 TRBV11-1A0A0K0K1C0 115 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 FRG2CA6NGY1 282 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 TIAF1O95411 115 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 EGR1P18146 543 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 MSMO1Q15800 293 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 PRSS8Q16651 343 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 WDFY1Q8IWB7 410 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 C9orf40Q8IXQ3 194 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 GAPTQ8N292 157 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 OR56B2PQ8NGI1 322 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 OR1L6Q8NGR2 347 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 PP6455Q8WZ26 134 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 PINX1Q96BK5 328 aaKnown RBP8.25□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF385AQ96PM9 386 aaKnown RBP8.25□□□□□ -1.09
CCDC40-212ENST00000574799 KCNK17Q96T54 332 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 CDX2Q99626 313 aaPredicted RBP8.25□□□□□ -1.09
CCDC40-212ENST00000574799 TMEM222Q9H0R3 208 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 SLC7A10Q9NS82 523 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 TMEM106BQ9NUM4 274 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 WNT16Q9UBV4 365 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 LHFPL6Q9Y693 200 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 KIAA1324LA8MWY0 1029 aaPredicted RBP8.25□□□□□ -1.09
CCDC40-212ENST00000574799 ALG1L2C9J202 215 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 DIRC3C9JPN6 131 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 SPINK4O60575 86 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 PAGE4O60829 102 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 DHRS3O75911 302 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 CRYAAP02489 173 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 PFN1P07737 140 aaKnown RBP8.25□□□□□ -1.09
CCDC40-212ENST00000574799 GCH1P30793 250 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 BLKP51451 505 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 CLDN17P56750 224 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 RPL19P84098 196 aaKnown RBP8.25□□□□□ -1.09
CCDC40-212ENST00000574799 MYBPHQ13203 477 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 CNN3Q15417 329 aaKnown RBP8.25□□□□□ -1.09
CCDC40-212ENST00000574799 RNASE8Q8TDE3 154 aaKnown RBP8.25□□□□□ -1.09
CCDC40-212ENST00000574799 GAL3ST2Q9H3Q3 398 aa8.25□□□□□ -1.09
CCDC40-212ENST00000574799 MS4A18H0YCH9 400 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 M0R135 149 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 LMO1P25800 156 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 MS4A18Q3C1V0 323 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 SPATA45Q537H7 98 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 TCF23Q7RTU1 214 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 ERASQ7Z444 233 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF441Q8N8Z8 693 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF738Q8NE65 137 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 OR4D5Q8NGN0 318 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 OR1K1Q8NGR3 316 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 OIT3Q8WWZ8 545 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 SPTSSAQ969W0 71 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF799Q96GE5 643 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 C1orf147Q96MC9 270 aaPredicted RBP8.24□□□□□ -1.09
CCDC40-212ENST00000574799 ALKBH7Q9BT30 221 aaPredicted RBP8.24□□□□□ -1.09
CCDC40-212ENST00000574799 METTL7AQ9H8H3 244 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 MRPS18CQ9Y3D5 142 aaKnown RBP8.24□□□□□ -1.09
CCDC40-212ENST00000574799 RRP8O43159 456 aaKnown RBP8.24□□□□□ -1.09
CCDC40-212ENST00000574799 TNFSF13O75888 250 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 UMODP07911 640 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 ATP6V1FQ16864 119 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 LYPD6Q86Y78 171 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 OSR2Q8N2R0 312 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 D2HGDHQ8N465 521 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 FAM89BQ8N5H3 189 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF596Q8TC21 504 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF501Q96CX3 271 aaPredicted RBP8.24□□□□□ -1.09
CCDC40-212ENST00000574799 NEIL1Q96FI4 390 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms