RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 ABHD5Q8WTS1 349 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 MBD3L1Q8WWY6 194 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 TMEM242Q9NWH2 141 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 DLL3Q9NYJ7 618 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 LRFN1Q9P244 771 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 RNF150Q9ULK6 438 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 BOKQ9UMX3 212 aaPredicted RBP13.29□□□□□ -0.28
NUP88-207ENST00000573584 PPP1R3CQ9UQK1 317 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 TRAV39A0A0B4J263 110 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 ARGFXA6NJG6 315 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 PATE3B3GLJ2 98 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 CYB5R3P00387 301 aaPredicted RBP13.29□□□□□ -0.28
NUP88-207ENST00000573584 DUSP3P51452 185 aaPredicted RBP13.29□□□□□ -0.28
NUP88-207ENST00000573584 ZNF880Q6PDB4 577 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 FAM180AQ6UWF9 173 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 SSX7Q7RTT5 188 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 HIST3H2BBQ8N257 126 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 ZNF525Q8N782 197 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 FRZBQ92765 325 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 LSM10Q969L4 123 aaKnown RBP13.29□□□□□ -0.28
NUP88-207ENST00000573584 RCC1LQ96I51 464 aaKnown RBP13.29□□□□□ -0.28
NUP88-207ENST00000573584 POM121L2Q96KW2 1035 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 OPA3Q9H6K4 179 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 OR14J1Q9UGF5 321 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 SS18L1O75177 396 aaPredicted RBP13.29□□□□□ -0.28
NUP88-207ENST00000573584 ZNF16P17020 682 aaPredicted RBP13.29□□□□□ -0.28
NUP88-207ENST00000573584 LILRB2Q8N423 598 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 CA5BP1Q8WTZ4 195 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 PSMG3Q9BT73 122 aaPredicted RBP13.29□□□□□ -0.28
NUP88-207ENST00000573584 CABLES2Q9BTV7 478 aa13.29□□□□□ -0.28
NUP88-207ENST00000573584 RBM7Q9Y580 266 aaKnown RBP13.29□□□□□ -0.28
NUP88-207ENST00000573584 ELOA3CA0A087WX78 387 aaPredicted RBP13.28□□□□□ -0.28
NUP88-207ENST00000573584 DEGS1O15121 323 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 IGKV1-5P01602 117 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 IGLV2-14P01704 120 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 SERPINA7P05543 415 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 CELA3AP09093 270 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 LHX2P50458 406 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 GNG3P63215 75 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 HBG1P69891 147 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 HBG2P69892 147 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 C4orf17Q53FE4 359 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 OR51B6Q9H340 312 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 MDH2P40926 338 aaKnown RBP13.28□□□□□ -0.28
NUP88-207ENST00000573584 RND2P52198 227 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 SERF2P84101 59 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 PLP2Q04941 152 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 LRRC75BQ2VPJ9 315 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 HAPLN4Q86UW8 402 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 SDF2L1Q9HCN8 221 aa13.28□□□□□ -0.28
NUP88-207ENST00000573584 RYDENQ9NUL5 291 aaKnown RBP13.28□□□□□ -0.28
NUP88-207ENST00000573584 CEBPZOSA8MTT3 80 aa13.27□□□□□ -0.28
NUP88-207ENST00000573584 RHBDL1O75783 438 aa13.27□□□□□ -0.28
NUP88-207ENST00000573584 ARR3P36575 388 aa13.27□□□□□ -0.28
NUP88-207ENST00000573584 TESK1Q15569 626 aa13.27□□□□□ -0.28
NUP88-207ENST00000573584 VAX2Q9UIW0 290 aa13.27□□□□□ -0.28
NUP88-207ENST00000573584 MPC1Q9Y5U8 109 aa13.27□□□□□ -0.28
NUP88-207ENST00000573584 CELSR3Q9NYQ7 3312 aa13.27□□□□□ -0.28
NUP88-207ENST00000573584 LRP5LA4QPB2 252 aa13.27□□□□□ -0.29
NUP88-207ENST00000573584 SYNGR4O95473 234 aa13.27□□□□□ -0.29
NUP88-207ENST00000573584 SPANXN5Q5MJ07 72 aa13.27□□□□□ -0.29
NUP88-207ENST00000573584 P2RX4Q99571 388 aa13.27□□□□□ -0.29
NUP88-207ENST00000573584 OR5B21A6NL26 309 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 PTBP3O95758 552 aaKnown RBP13.26□□□□□ -0.29
NUP88-207ENST00000573584 CLDN18P56856 261 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 SSPNQ14714 243 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 DCAF12Q5T6F0 453 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 MRGPRGQ86SM5 289 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 MAFAQ8NHW3 353 aaPredicted RBP13.26□□□□□ -0.29
NUP88-207ENST00000573584 APH1AQ96BI3 265 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 KCNS2Q9ULS6 477 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 OR5H1A6NKK0 313 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.26□□□□□ -0.29
NUP88-207ENST00000573584 WNT2P09544 360 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 FABP4P15090 132 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 CA6P23280 308 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 ELLP55199 621 aaPredicted RBP13.26□□□□□ -0.29
NUP88-207ENST00000573584 IGFBP7Q16270 282 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 ZNF585BQ52M93 769 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 OR1K1Q8NGR3 316 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 UBALD1Q8TB05 177 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 CT55Q8WUE5 264 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 OR4C12Q96R67 309 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 SSX3Q99909 188 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 MAP1LC3B2A6NCE7 125 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 WDR1O75083 606 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 HIST1H1BP16401 226 aaKnown RBP13.26□□□□□ -0.29
NUP88-207ENST00000573584 DEFA6Q01524 100 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 TMEM41BQ5BJD5 291 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 OR2M7Q8NG81 312 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 THOC3Q96J01 351 aaKnown RBP13.26□□□□□ -0.29
NUP88-207ENST00000573584 MAP1LC3BQ9GZQ8 125 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 WDR61Q9GZS3 305 aaKnown RBP13.26□□□□□ -0.29
NUP88-207ENST00000573584 RBKSQ9H477 322 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 ZNF703Q9H7S9 590 aaPredicted RBP13.26□□□□□ -0.29
NUP88-207ENST00000573584 GFOD1Q9NXC2 390 aa13.26□□□□□ -0.29
NUP88-207ENST00000573584 TNRC6AQ8NDV7 1962 aaKnown RBP13.25□□□□□ -0.29
NUP88-207ENST00000573584 NPIPB11E5RHQ5 1161 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 TGOLN2O43493 480 aa13.25□□□□□ -0.29
NUP88-207ENST00000573584 ACSF3Q4G176 576 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms