RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 MFFQ9GZY8 342 aa9.76□□□□□ -0.85
CCDC40-208ENST00000572270 FBXL15Q9H469 300 aa9.76□□□□□ -0.85
CCDC40-208ENST00000572270 REEP1Q9H902 201 aa9.76□□□□□ -0.85
CCDC40-208ENST00000572270 RAB9BQ9NP90 201 aa9.76□□□□□ -0.85
CCDC40-208ENST00000572270 FBXL17Q9UF56 701 aa9.76□□□□□ -0.85
CCDC40-208ENST00000572270 A0A0B4J203 849 aa9.75□□□□□ -0.85
CCDC40-208ENST00000572270 CCDC182A6NF36 153 aa9.75□□□□□ -0.85
CCDC40-208ENST00000572270 H3BUA1 57 aa9.75□□□□□ -0.85
CCDC40-208ENST00000572270 RRHO14718 337 aa9.75□□□□□ -0.85
CCDC40-208ENST00000572270 UBCP0CG48 685 aaKnown RBP9.75□□□□□ -0.85
CCDC40-208ENST00000572270 ALDH3A2P51648 485 aa9.75□□□□□ -0.85
CCDC40-208ENST00000572270 IL13RA2Q14627 380 aa9.75□□□□□ -0.85
CCDC40-208ENST00000572270 RBMS2Q15434 407 aaKnown RBP9.75□□□□□ -0.85
CCDC40-208ENST00000572270 ZNF439Q8NDP4 499 aa9.75□□□□□ -0.85
CCDC40-208ENST00000572270 OR10V1Q8NGI7 309 aa9.75□□□□□ -0.85
CCDC40-208ENST00000572270 MRPL20Q9BYC9 149 aaKnown RBP9.75□□□□□ -0.85
CCDC40-208ENST00000572270 ARPC2O15144 300 aa9.74□□□□□ -0.85
CCDC40-208ENST00000572270 ORC5O43913 435 aa9.74□□□□□ -0.85
CCDC40-208ENST00000572270 AADACP22760 399 aa9.74□□□□□ -0.85
CCDC40-208ENST00000572270 ZNF134P52741 427 aa9.74□□□□□ -0.85
CCDC40-208ENST00000572270 DEFB114Q30KQ6 69 aa9.74□□□□□ -0.85
CCDC40-208ENST00000572270 CT45A1Q5HYN5 189 aa9.74□□□□□ -0.85
CCDC40-208ENST00000572270 CT45A3Q8NHU0 189 aa9.74□□□□□ -0.85
CCDC40-208ENST00000572270 CCDC107Q8WV48 283 aa9.74□□□□□ -0.85
CCDC40-208ENST00000572270 FGGYQ96C11 551 aa9.74□□□□□ -0.85
CCDC40-208ENST00000572270 WDR89Q96FK6 387 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-208ENST00000572270 DPCDQ9BVM2 203 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-208ENST00000572270 ZC4H2Q9NQZ6 224 aa9.74□□□□□ -0.85
CCDC40-208ENST00000572270 MBNL3Q9NUK0 354 aaKnown RBP9.74□□□□□ -0.85
CCDC40-208ENST00000572270 GAB2Q9UQC2 676 aa9.74□□□□□ -0.85
CCDC40-208ENST00000572270 SPINT2O43291 252 aa9.73□□□□□ -0.85
CCDC40-208ENST00000572270 CDK5Q00535 292 aa9.73□□□□□ -0.85
CCDC40-208ENST00000572270 TRIM25Q14258 630 aaKnown RBP9.73□□□□□ -0.85
CCDC40-208ENST00000572270 TMEM30BQ3MIR4 351 aa9.73□□□□□ -0.85
CCDC40-208ENST00000572270 TMEM177Q53S58 311 aa9.73□□□□□ -0.85
CCDC40-208ENST00000572270 SUMF2Q8NBJ7 301 aa9.73□□□□□ -0.85
CCDC40-208ENST00000572270 BVESQ8NE79 360 aa9.73□□□□□ -0.85
CCDC40-208ENST00000572270 OR52B4Q8NGK2 314 aa9.73□□□□□ -0.85
CCDC40-208ENST00000572270 CLCC1Q96S66 551 aa9.73□□□□□ -0.85
CCDC40-208ENST00000572270 FEVQ99581 238 aa9.73□□□□□ -0.85
CCDC40-208ENST00000572270 CLN6Q9NWW5 311 aa9.73□□□□□ -0.85
CCDC40-208ENST00000572270 FCN1O00602 326 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 UBE2CO00762 179 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 RTL8CO15255 209 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 TRBV12-3P01733 135 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 MT-ND2P03891 347 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 KIR2DS2P43631 304 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 NANOS2P60321 138 aaKnown RBP9.72□□□□□ -0.85
CCDC40-208ENST00000572270 STEAP3Q658P3 488 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 ELP2Q6IA86 826 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 ZNF343Q6P1L6 599 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 PRR18Q8N4B5 295 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 OR13C9Q8NGT0 318 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 C11orf45Q8TAV5 145 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 SNAPC3Q92966 411 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 ATP6V1G3Q96LB4 118 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 TECRQ9NZ01 308 aaKnown RBP9.72□□□□□ -0.85
CCDC40-208ENST00000572270 FBXL7Q9UJT9 491 aa9.72□□□□□ -0.85
CCDC40-208ENST00000572270 IGLL5B9A064 214 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 AIPO00170 330 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 CDK2AP2O75956 126 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 ZSCAN26Q16670 478 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 ANKRD55Q3KP44 614 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 PIGYQ3MUY2 71 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 TMEM244Q5VVB8 128 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 OR2T5Q6IEZ7 315 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 ZNF562Q6V9R5 426 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 PRSS35Q8N3Z0 413 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 OR5T1Q8NG75 326 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 OR2T29Q8NH02 315 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 GRPEL2Q8TAA5 225 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 NEK7Q8TDX7 302 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 GIPC3Q8TF64 312 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 FBLIM1Q8WUP2 373 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 TBX5Q99593 518 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 ABHD14AQ9BUJ0 271 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 ADGRL4Q9HBW9 690 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 TVP23BQ9NYZ1 205 aa9.71□□□□□ -0.86
CCDC40-208ENST00000572270 METTL15A6NJ78 407 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 OR7C1O76099 320 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-208ENST00000572270 CA2P00918 260 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 GSTP1P09211 210 aaKnown RBP9.7□□□□□ -0.86
CCDC40-208ENST00000572270 OSMP13725 252 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 HSD17B1P14061 328 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 DEFA5Q01523 94 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 KISS1Q15726 138 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 TMEM236Q5W0B7 351 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 FAM131AQ6UXB0 335 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 SSX6Q7RTT6 188 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 STX19Q8N4C7 294 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 STPG3Q8N7X2 389 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 MRPS24Q96EL2 167 aaKnown RBP9.7□□□□□ -0.86
CCDC40-208ENST00000572270 USMG5Q96IX5 58 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 ZNF556Q9HAH1 456 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 H2AFY2Q9P0M6 372 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-208ENST00000572270 APLNQ9ULZ1 77 aa9.7□□□□□ -0.86
CCDC40-208ENST00000572270 SLC22A1O15245 554 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 FOLR2P14207 255 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 CTRB1P17538 263 aa9.69□□□□□ -0.86
CCDC40-208ENST00000572270 RPS16P62249 146 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms