RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 OR13C9Q8NGT0 318 aa6.56□□□□□ -1.36
SMG1-216ENST00000569122 CT45A3Q8NHU0 189 aa6.56□□□□□ -1.36
SMG1-216ENST00000569122 PLPPR1Q8TBJ4 325 aa6.56□□□□□ -1.36
SMG1-216ENST00000569122 CASTOR1Q8WTX7 329 aa6.56□□□□□ -1.36
SMG1-216ENST00000569122 TMEM68Q96MH6 324 aa6.56□□□□□ -1.36
SMG1-216ENST00000569122 RNF5Q99942 180 aa6.56□□□□□ -1.36
SMG1-216ENST00000569122 OVOL2Q9BRP0 275 aa6.56□□□□□ -1.36
SMG1-216ENST00000569122 GGTLC1Q9BX51 225 aa6.56□□□□□ -1.36
SMG1-216ENST00000569122 JAM3Q9BX67 310 aa6.56□□□□□ -1.36
SMG1-216ENST00000569122 PEF1Q9UBV8 284 aaKnown RBP6.56□□□□□ -1.36
SMG1-216ENST00000569122 WARS2Q9UGM6 360 aaKnown RBP6.56□□□□□ -1.36
SMG1-216ENST00000569122 KIAA2026Q5HYC2 2103 aa6.56□□□□□ -1.36
SMG1-216ENST00000569122 DNAH10Q8IVF4 4471 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 LOC102724200A0A096LPH7 203 aaPredicted RBP6.55□□□□□ -1.36
SMG1-216ENST00000569122 IGHV3-43A0A0B4J1X8 118 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 A0A0J9YWU9 116 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 A0A1W2PQL4 384 aaPredicted RBP6.55□□□□□ -1.36
SMG1-216ENST00000569122 RRHO14718 337 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 RBBP9O75884 186 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 OR7C1O76099 320 aaPredicted RBP6.55□□□□□ -1.36
SMG1-216ENST00000569122 IGHV3-43DP0DP04 118 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 ATP6V1B2P21281 511 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 MAP2K4P45985 399 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 MECP2P51608 486 aaKnown RBP6.55□□□□□ -1.36
SMG1-216ENST00000569122 CRISP1P54107 249 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 ANKRD55Q3KP44 614 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 ZNF691Q5VV52 312 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 TMEM236Q5W0B7 351 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 DHFR2Q86XF0 187 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 SERPINA12Q8IW75 414 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 PRSS35Q8N3Z0 413 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 POC5Q8NA72 575 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 ZNF439Q8NDP4 499 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 LFNGQ8NES3 379 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 OR13C3Q8NGS6 347 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 DYNLRB2Q8TF09 96 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 SNAPC3Q92966 411 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 USMG5Q96IX5 58 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 RDH12Q96NR8 316 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 MYCBPQ99417 103 aaPredicted RBP6.55□□□□□ -1.36
SMG1-216ENST00000569122 PAK1IP1Q9NWT1 392 aaPredicted RBP6.55□□□□□ -1.36
SMG1-216ENST00000569122 TECRQ9NZ01 308 aaKnown RBP6.55□□□□□ -1.36
SMG1-216ENST00000569122 ENOPH1Q9UHY7 261 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 TRAPPC2LQ9UL33 140 aa6.55□□□□□ -1.36
SMG1-216ENST00000569122 TRAV39A0A0B4J263 110 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 ANKRD34BA5PLL1 514 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 IZUMO1RA6ND01 250 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 AIPO00170 330 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 UBE2CO00762 179 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 SLC22A1O15245 554 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 SLC31A2O15432 143 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 SULT1B1O43704 296 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 PRKYO43930 277 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 MITFO75030 526 aaPredicted RBP6.54□□□□□ -1.36
SMG1-216ENST00000569122 MT-ND4P03905 459 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 IFNA4P05014 189 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 GSTP1P09211 210 aaKnown RBP6.54□□□□□ -1.36
SMG1-216ENST00000569122 EGR2P11161 476 aaPredicted RBP6.54□□□□□ -1.36
SMG1-216ENST00000569122 MC5RP33032 325 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 CCR9P51686 369 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 ZNF134P52741 427 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 NDPQ00604 133 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 MPV17LQ2QL34 196 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 NHLRC3Q5JS37 347 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 FAM209BQ5JX69 171 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 AADACL4Q5VUY2 407 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 FAM71F2Q6NXP2 309 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 Q6ZWC4 215 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 LYG2Q86SG7 212 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 ARHGAP24Q8N264 748 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 TCEANCQ8N8B7 351 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 OR10H4Q8NGA5 316 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 OR2G2Q8NGZ5 317 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 NEK7Q8TDX7 302 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 PHLDA1Q8WV24 401 aaPredicted RBP6.54□□□□□ -1.36
SMG1-216ENST00000569122 CCDC107Q8WV48 283 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 GPER1Q99527 375 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 S100A13Q99584 98 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 TBX5Q99593 518 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 ELAC2Q9BQ52 826 aaKnown RBP6.54□□□□□ -1.36
SMG1-216ENST00000569122 ABHD14AQ9BUJ0 271 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 SPACA1Q9HBV2 294 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 ARL8BQ9NVJ2 186 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 GNG8Q9UK08 70 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 ST3GAL6Q9Y274 331 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 FBXO7Q9Y3I1 522 aa6.54□□□□□ -1.36
SMG1-216ENST00000569122 TCRBV5S2A0A599 114 aa6.53□□□□□ -1.36
SMG1-216ENST00000569122 OR5H14A6NHG9 310 aa6.53□□□□□ -1.36
SMG1-216ENST00000569122 ZNF785A8K8V0 405 aa6.53□□□□□ -1.36
SMG1-216ENST00000569122 ZNF780AO75290 641 aaPredicted RBP6.53□□□□□ -1.36
SMG1-216ENST00000569122 HTR3BO95264 441 aa6.53□□□□□ -1.36
SMG1-216ENST00000569122 CD7P09564 240 aa6.53□□□□□ -1.36
SMG1-216ENST00000569122 FASP25445 335 aa6.53□□□□□ -1.36
SMG1-216ENST00000569122 APOC4P55056 127 aa6.53□□□□□ -1.36
SMG1-216ENST00000569122 TMED1Q13445 227 aa6.53□□□□□ -1.36
SMG1-216ENST00000569122 GUCA2BQ16661 112 aa6.53□□□□□ -1.36
SMG1-216ENST00000569122 PIGYQ3MUY2 71 aa6.53□□□□□ -1.36
SMG1-216ENST00000569122 CD300EQ496F6 205 aaPredicted RBP6.53□□□□□ -1.36
SMG1-216ENST00000569122 MORN2Q502X0 79 aa6.53□□□□□ -1.36
SMG1-216ENST00000569122 ATAD3CQ5T2N8 411 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms