RNA–Protein interactions for RNA: ENST00000568539.1

SF3B3-212, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-212ENST00000568539 METTL11BQ5VVY1 283 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 OR10A7Q8NGE5 316 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 OR52M1Q8NGK5 317 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 OR4A4PQ8NGN8 299 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 TNFRSF14Q92956 283 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 GALMQ96C23 342 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 KIRREL1Q96J84 757 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 CABLES2Q9BTV7 478 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 TMPRSS13Q9BYE2 586 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 WDR12Q9GZL7 423 aaKnown RBP6.92□□□□□ -1.3
SF3B3-212ENST00000568539 UNKLQ9H9P5 680 aaKnown RBP6.92□□□□□ -1.3
SF3B3-212ENST00000568539 RAB9BQ9NP90 201 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 SESN1Q9Y6P5 492 aa6.92□□□□□ -1.3
SF3B3-212ENST00000568539 MAP1AP78559 2803 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-212ENST00000568539 A0A087X0M5 115 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 A0A1B0GX30 115 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 ANKRD20A5PA0PJZ0 165 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 SDCBPO00560 298 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-212ENST00000568539 TOX4O94842 621 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 DIRAS3O95661 229 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 HLA-DMAP28067 261 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 CD40LGP29965 261 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 DLX1P56177 255 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 TAS2R46P59540 309 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 GNMTQ14749 295 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 LTC4SQ16873 150 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 CHRFAM7AQ494W8 412 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 IGSF11Q5DX21 431 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 UTF1Q5T230 341 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 LCE2CQ5TA81 110 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 STEAP3Q658P3 488 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 HCP5Q6MZN7 132 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 FAM53AQ6NSI3 398 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-212ENST00000568539 FAHD2BQ6P2I3 314 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-212ENST00000568539 ZNF782Q6ZMW2 699 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-212ENST00000568539 VMO1Q7Z5L0 202 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 TMEM229BQ8NBD8 167 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 OR5AP2Q8NGF4 316 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 OR52L2PQ8NGH6 319 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 IL1F10Q8WWZ1 152 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 UPRTQ96BW1 309 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 FAHD2AQ96GK7 314 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 TBX15Q96SF7 602 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 TSC22D3Q99576 134 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 PCGF1Q9BSM1 259 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 CCDC32Q9BV29 185 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 TMEM133Q9H2Q1 129 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 C7orf69Q9H7B7 122 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 OR2S2Q9NQN1 319 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 SIRT7Q9NRC8 400 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 TAS2R8Q9NYW2 309 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 OR1A1Q9P1Q5 309 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 ZNF107Q9UII5 783 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-212ENST00000568539 JPT1Q9UK76 154 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 AUP1Q9Y679 476 aa6.91□□□□□ -1.3
SF3B3-212ENST00000568539 VPS13CQ709C8 3753 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 TRBV6-7A0A0A0MS04 114 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 IGHV3-43A0A0B4J1X8 118 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 ZNF736B4DX44 427 aaPredicted RBP6.9□□□□□ -1.3
SF3B3-212ENST00000568539 RNASEK-C17orf49H0YIS7 233 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 J3QRK9 145 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 BET1O15155 118 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 YPEL1O60688 119 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 PMP2P02689 132 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 CD74P04233 296 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 CD3DP04234 171 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 CSF1P09603 554 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 CTXN2P0C2S0 81 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 IGHV3-43DP0DP04 118 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 IL7P13232 177 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 TBPP20226 339 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 ZBTB25P24278 435 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 NFYBP25208 207 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 CD34P28906 385 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 HRH1P35367 487 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 PPP1CCP36873 323 aaKnown RBP6.9□□□□□ -1.3
SF3B3-212ENST00000568539 RFX2P48378 723 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 TAS2R19P59542 299 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 ARPC4P59998 168 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 PRB3Q04118 309 aaPredicted RBP6.9□□□□□ -1.3
SF3B3-212ENST00000568539 KLF9Q13886 244 aaPredicted RBP6.9□□□□□ -1.3
SF3B3-212ENST00000568539 CDK10Q15131 360 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 MORN2Q502X0 79 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 ACTBL2Q562R1 376 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 VAX1Q5SQQ9 334 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 NCR3LG1Q68D85 454 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 OVCH2Q7RTZ1 564 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 ZNF439Q8NDP4 499 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 OR10V1Q8NGI7 309 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 OR5H2Q8NGV7 314 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 YPEL2Q96QA6 119 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 SMR3AQ99954 134 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 SUCNR1Q9BXA5 334 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 TOLLIPQ9H0E2 274 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 NECAP2Q9NVZ3 263 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 GFOD1Q9NXC2 390 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 GNG12Q9UBI6 72 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 SLC23A1Q9UHI7 598 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 KCNS2Q9ULS6 477 aa6.9□□□□□ -1.3
SF3B3-212ENST00000568539 IGHV2-26A0A0B4J1V2 119 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms