RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 KCPQ6ZWJ8 1503 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 A0A0U1RQV1 116 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 TEX50A0A1B0GTY4 177 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 MYBPHLA2RUH7 354 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 C5orf63A6NC05 138 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 ARGFXA6NJG6 315 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 M0QYV0 167 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 LGALS9O00182 355 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 CHST10O43529 356 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 CHP2O43745 196 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 KLRC4O43908 158 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 PLXNC1O60486 1568 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 PLIN3O60664 434 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 IFNA14P01570 189 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 ATP5G1P05496 136 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 SOD3P08294 240 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 OR4Q2P0C623 313 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF806P0C7X5 589 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 P0C879 139 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 ZBTB25P24278 435 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 GADD45AP24522 165 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 MIPP30301 263 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF136P52737 540 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 H2BFSP57053 126 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 PRDX4Q13162 271 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 EDDM3AQ14507 147 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 C16orf72Q14CZ0 275 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 PTGES3Q15185 160 aaKnown RBP2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 QSER1Q2KHR3 1735 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 FBXL19-AS1Q494R0 122 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 ABCA11PQ4W5N1 156 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 LIN52Q52LA3 116 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 TCTEX1D4Q5JR98 221 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 ELP2Q6IA86 826 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 DHRS4L2Q6PKH6 230 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 CLEC20AQ6ZU45 233 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 SSH2Q76I76 1423 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 FA2HQ7L5A8 372 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 TCF23Q7RTU1 214 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 LYG2Q86SG7 212 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 NALCNQ8IZF0 1738 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 LRRC25Q8N386 305 aaPredicted RBP2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 OR2M7Q8NG81 312 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 OR1L8Q8NGR8 309 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 ORAOV1Q8WV07 137 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 TAMM41Q96BW9 452 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 DCUN1D1Q96GG9 259 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 DIRAS2Q96HU8 199 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 C18orf15Q96N68 181 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 CAMK2N2Q96S95 79 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 NIPSNAP1Q9BPW8 284 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 CMSS1Q9BQ75 279 aaKnown RBP2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 EBPLQ9BY08 206 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 GNB1LQ9BYB4 327 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 PCBD2Q9H0N5 130 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 LINC00597Q9H2U6 94 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 VNN3Q9NY84 501 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 TAS2R5Q9NYW4 299 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 DOK5Q9P104 306 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 OPTCQ9UBM4 332 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 YTHDF2Q9Y5A9 579 aaKnown RBP2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 WSB1Q9Y6I7 421 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 ZNF462Q96JM2 2506 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 LRRC37A3O60309 1634 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 ZBED9Q6R2W3 1325 aa2.38□□□□□ -2.03
HERPUD1-211ENST00000566550 ARHGAP5Q13017 1502 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 PIKFYVEQ9Y2I7 2098 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 A0A087WYN8 130 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 IGHV2-26A0A0B4J1V2 119 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 GMNCA6NCL1 334 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 A6NDX4 124 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 OR5H1A6NKK0 313 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 CD300LBA8K4G0 201 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 GYG2O15488 501 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 RGS5O15539 181 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 LINC01565O15544 149 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 NOS1APO75052 506 aaPredicted RBP2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 SS18L1O75177 396 aaPredicted RBP2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 CST2P09228 141 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 FBP1P09467 338 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 CD79AP11912 226 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 ORM2P19652 201 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 MAP2K4P45985 399 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 RPL5P46777 297 aaKnown RBP2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 CRYBA4P53673 196 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM33P57088 247 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 TAS2R41P59536 307 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 DAD1P61803 113 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 IFITM2Q01629 132 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 PAFAH1B3Q15102 231 aaKnown RBP2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 CDK10Q15131 360 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 ELOCQ15369 112 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 ALX1Q15699 326 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 KRTAP24-1Q3LI83 254 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 TMEM97Q5BJF2 176 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 FAM78AQ5JUQ0 283 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 HENMT1Q5T8I9 393 aaKnown RBP2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 N4BP2L1Q5TBK1 243 aaPredicted RBP2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 SCGB1D4Q6XE38 83 aa2.37□□□□□ -2.03
HERPUD1-211ENST00000566550 IL34Q6ZMJ4 242 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms