RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 C10orf105Q8TEF2 133 aa15.48■□□□□ 0.07
COMMD4-213ENST00000565834 ZNF714Q96N38 554 aa15.48■□□□□ 0.07
COMMD4-213ENST00000565834 OR2W1Q9Y3N9 320 aa15.48■□□□□ 0.07
COMMD4-213ENST00000565834 PRAF2O60831 178 aa15.47■□□□□ 0.07
COMMD4-213ENST00000565834 DNASE1P24855 282 aa15.47■□□□□ 0.07
COMMD4-213ENST00000565834 GNMTQ14749 295 aa15.47■□□□□ 0.07
COMMD4-213ENST00000565834 ESCO2Q56NI9 601 aa15.47■□□□□ 0.07
COMMD4-213ENST00000565834 ZFAND1Q8TCF1 268 aa15.47■□□□□ 0.07
COMMD4-213ENST00000565834 SSBP3Q9BWW4 388 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-213ENST00000565834 LINC00574Q9H8X3 128 aa15.47■□□□□ 0.07
COMMD4-213ENST00000565834 BEX4Q9NWD9 120 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-213ENST00000565834 GNG12Q9UBI6 72 aa15.47■□□□□ 0.07
COMMD4-213ENST00000565834 JPT1Q9UK76 154 aa15.47■□□□□ 0.07
COMMD4-213ENST00000565834 C14orf166Q9Y224 244 aaKnown RBP15.47■□□□□ 0.07
COMMD4-213ENST00000565834 ALG5Q9Y673 324 aa15.47■□□□□ 0.07
COMMD4-213ENST00000565834 IGHV3-43A0A0B4J1X8 118 aa15.46■□□□□ 0.07
COMMD4-213ENST00000565834 IGHV2-5P01817 119 aa15.46■□□□□ 0.07
COMMD4-213ENST00000565834 IGHV3-43DP0DP04 118 aa15.46■□□□□ 0.07
COMMD4-213ENST00000565834 OMGP23515 440 aa15.46■□□□□ 0.07
COMMD4-213ENST00000565834 PPP1CCP36873 323 aaKnown RBP15.46■□□□□ 0.07
COMMD4-213ENST00000565834 UCP3P55916 312 aa15.46■□□□□ 0.07
COMMD4-213ENST00000565834 DSCR9P59020 149 aa15.46■□□□□ 0.07
COMMD4-213ENST00000565834 OR10V1Q8NGI7 309 aa15.46■□□□□ 0.07
COMMD4-213ENST00000565834 DACT3Q96B18 629 aaPredicted RBP15.46■□□□□ 0.07
COMMD4-213ENST00000565834 TOLLIPQ9H0E2 274 aa15.46■□□□□ 0.07
COMMD4-213ENST00000565834 ALX4Q9H161 411 aaPredicted RBP15.46■□□□□ 0.07
COMMD4-213ENST00000565834 C5orf66Q9H5L9 145 aa15.46■□□□□ 0.07
COMMD4-213ENST00000565834 APCP25054 2843 aa15.46■□□□□ 0.06
COMMD4-213ENST00000565834 PHF1O43189 567 aaPredicted RBP15.45■□□□□ 0.06
COMMD4-213ENST00000565834 CCL3L1P16619 93 aa15.45■□□□□ 0.06
COMMD4-213ENST00000565834 PI3P19957 117 aa15.45■□□□□ 0.06
COMMD4-213ENST00000565834 TAS2R31P59538 309 aa15.45■□□□□ 0.06
COMMD4-213ENST00000565834 TMEM30BQ3MIR4 351 aa15.45■□□□□ 0.06
COMMD4-213ENST00000565834 SLC38A6Q8IZM9 456 aa15.45■□□□□ 0.06
COMMD4-213ENST00000565834 CLDND2Q8NHS1 167 aa15.45■□□□□ 0.06
COMMD4-213ENST00000565834 SECTM1Q8WVN6 248 aa15.45■□□□□ 0.06
COMMD4-213ENST00000565834 IDI2-AS1Q9NZ38 188 aa15.45■□□□□ 0.06
COMMD4-213ENST00000565834 RPUSD1Q9UJJ7 312 aaKnown RBP15.45■□□□□ 0.06
COMMD4-213ENST00000565834 IGKV1D-13A0A0B4J2D9 117 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 IL5P05113 134 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 CTSDP07339 412 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-213ENST00000565834 IGKV1-13P0DP09 117 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 VSIG10L2P0DP72 767 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 LUMP51884 338 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-213ENST00000565834 LOXL3P58215 753 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 PRAMEF5Q5TYX0 476 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 METTL11BQ5VVY1 283 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 FAM53AQ6NSI3 398 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-213ENST00000565834 LPCAT3Q6P1A2 487 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 GLDNQ6ZMI3 551 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-213ENST00000565834 SLC25A42Q86VD7 318 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 ADAD2Q8NCV1 583 aaKnown RBP15.44■□□□□ 0.06
COMMD4-213ENST00000565834 C8orf46Q8TAG6 207 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 CAPSLQ8WWF8 208 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 RTBDNQ9BSG5 229 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-213ENST00000565834 SLC5A7Q9GZV3 580 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 PARP12Q9H0J9 701 aaKnown RBP15.44■□□□□ 0.06
COMMD4-213ENST00000565834 RBM7Q9Y580 266 aaKnown RBP15.44■□□□□ 0.06
COMMD4-213ENST00000565834 BAHCC1Q9P281 2608 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 NAV2Q8IVL1 2488 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 A0A0A6YYJ9 748 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 A0A1W2PPH5 198 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 C7orf66A4D0T2 115 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 VWC2LB2RUY7 222 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 AKR1C4P17516 323 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 BCAP31P51572 246 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 ABCA11PQ4W5N1 156 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 C4orf46Q504U0 113 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 CADM3Q8N126 398 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 OR10A7Q8NGE5 316 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 RAB39BQ96DA2 213 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 SEC22CQ9BRL7 303 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 RSRP1Q9BUV0 290 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 GPN1Q9HCN4 374 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-213ENST00000565834 GFOD1Q9NXC2 390 aa15.44■□□□□ 0.06
COMMD4-213ENST00000565834 PPIAL4CA0A0B4J2A2 164 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 YPEL1O60688 119 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 RGS11O94810 467 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 OR4E1P0C645 316 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 PPIAL4GP0DN37 164 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 NFYBP25208 207 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 LMO4P61968 165 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 CBX3Q13185 183 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 DEFB113Q30KQ7 82 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 MORN2Q502X0 79 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 CD276Q5ZPR3 534 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 FAHD2BQ6P2I3 314 aaPredicted RBP15.43■□□□□ 0.06
COMMD4-213ENST00000565834 HEPN1Q6WQI6 88 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 OR52M1Q8NGK5 317 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 EDARADDQ8WWZ3 215 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 FAHD2AQ96GK7 314 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 YPEL2Q96QA6 119 aa15.43■□□□□ 0.06
COMMD4-213ENST00000565834 LOC105371242A0A075B767 164 aa15.42■□□□□ 0.06
COMMD4-213ENST00000565834 IGHV4-30-2A0A087WSY4 118 aa15.42■□□□□ 0.06
COMMD4-213ENST00000565834 C22orf46C9J442 243 aa15.42■□□□□ 0.06
COMMD4-213ENST00000565834 HNRNPCP07910 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
COMMD4-213ENST00000565834 OR8U9P0C7N5 309 aa15.42■□□□□ 0.06
COMMD4-213ENST00000565834 DLX6P56179 175 aa15.42■□□□□ 0.06
COMMD4-213ENST00000565834 UBE2MP61081 183 aaKnown RBP15.42■□□□□ 0.06
COMMD4-213ENST00000565834 TMEM128Q5BJH2 165 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms