RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 FUT9Q9Y231 359 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 TBL2Q9Y4P3 447 aaKnown RBP4.77□□□□□ -1.65
CHD9-210ENST00000564582 LRP12Q9Y561 859 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 TRAPPC1Q9Y5R8 145 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 PXMP4Q9Y6I8 212 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 LY96Q9Y6Y9 160 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 TMEM56-RWDD3S4R434 201 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 PLXNA4Q9HCM2 1894 aa4.77□□□□□ -1.65
CHD9-210ENST00000564582 IGHV1-69-2A0A0G2JMI3 117 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 EDDM13A0A1B0GTR0 161 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 A0A1B0GV72 72 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 A0A1W2PQD3 144 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FEZF1A0PJY2 475 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A10PA6NDY2 464 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A20PA6NIJ5 464 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A8PA6NJQ4 464 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 GLOD5A6NK44 160 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A7PA6NKC0 464 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A22PA8MWA6 464 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A12PA8MX19 464 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A23PA8MXZ1 464 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 ZNF814B7Z6K7 855 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A26D6RGX4 464 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 DEGS1O15121 323 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 RAMP3O60896 148 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 SRSF10O75494 262 aaKnown RBP4.76□□□□□ -1.65
CHD9-210ENST00000564582 NGFRP08138 427 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 OR5G3P0C626 314 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A13PP0C7W8 464 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FAM90A24PP0C7X0 464 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 C8orf89P0DMQ9 161 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 PGCP20142 388 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FUT3P21217 361 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 CCL1P22362 96 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 AADACP22760 399 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 CD70P32970 193 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 OR1D2P34982 312 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 PPP1CCP36873 323 aaKnown RBP4.76□□□□□ -1.65
CHD9-210ENST00000564582 NPBWR2P48146 333 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 TTC3P53804 2025 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 PIGPP57054 158 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FOXL2P58012 376 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 ERVS71-1P61550 626 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 HERV-K104P61576 105 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 PPP1CBP62140 327 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 GRB2P62993 217 aaKnown RBP4.76□□□□□ -1.65
CHD9-210ENST00000564582 NTHL1P78549 312 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 RHOGP84095 191 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FMODQ06828 376 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 RPL18Q07020 188 aaKnown RBP4.76□□□□□ -1.65
CHD9-210ENST00000564582 FOXF1Q12946 379 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 UNC119Q13432 240 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 MSMO1Q15800 293 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 STPG1Q5TH74 334 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 WDR25Q64LD2 544 aaPredicted RBP4.76□□□□□ -1.65
CHD9-210ENST00000564582 ETFRF1Q6IPR1 90 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 PRR27Q6MZM9 219 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 MRPL54Q6P161 138 aaKnown RBP4.76□□□□□ -1.65
CHD9-210ENST00000564582 ZNF343Q6P1L6 599 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 TEX38Q6PEX7 206 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 Q6ZS49 121 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 C1orf174Q8IYL3 243 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 TMEM252Q8N6L7 170 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 GVQW1Q8N7I0 195 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 ZFP62Q8NB50 900 aaPredicted RBP4.76□□□□□ -1.65
CHD9-210ENST00000564582 OR51T1Q8NGJ9 327 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 PSMF1Q92530 271 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 ERGIC1Q969X5 290 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 RPUSD4Q96CM3 377 aaKnown RBP4.76□□□□□ -1.65
CHD9-210ENST00000564582 GPER1Q99527 375 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 PMCHL2Q9BQD1 86 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 FAAP24Q9BTP7 215 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 SMIM3Q9BZL3 60 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 STRADBQ9C0K7 418 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 ZNF286AQ9HBT8 521 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 G6PC2Q9NQR9 355 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 SLC39A9Q9NUM3 307 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 PLEKHJ1Q9NW61 149 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 ST3GAL6Q9Y274 331 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 KLHDC2Q9Y2U9 406 aa4.76□□□□□ -1.65
CHD9-210ENST00000564582 IGLV1-36A0A0B4J1U3 117 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 J3QR89 54 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 ZNF253O75346 499 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 ZNF737O75373 536 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 OR2J2O76002 312 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 KLF8O95600 359 aaPredicted RBP4.75□□□□□ -1.65
CHD9-210ENST00000564582 TIMP1P01033 207 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 IGKV2-30P06310 120 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 SMIM17P0DL12 118 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 CRISP2P16562 243 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 HNRNPA2B1P22626 353 aaKnown RBP4.75□□□□□ -1.65
CHD9-210ENST00000564582 PTGER4P35408 488 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 APLNRP35414 380 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 GUCA1AP43080 201 aaPredicted RBP4.75□□□□□ -1.65
CHD9-210ENST00000564582 REG1BP48304 166 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 ASCL1P50553 236 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 CLDN18P56856 261 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 ELAVL3Q14576 367 aaKnown RBP4.75□□□□□ -1.65
CHD9-210ENST00000564582 CD226Q15762 336 aa4.75□□□□□ -1.65
CHD9-210ENST00000564582 ADIRFQ15847 76 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms