RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 IGHV3-43A0A0B4J1X8 118 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 IGKV1D-13A0A0B4J2D9 117 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 TRAPPC2P0DI81 140 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 TRAPPC2BP0DI82 140 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 IGHV3-43DP0DP04 118 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 IGKV1-13P0DP09 117 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 GNMTQ14749 295 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 ZNF525Q8N782 197 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 ZNF431Q8TF32 576 aaPredicted RBP18.16■□□□□ 0.5
LINC01960-201ENST00000563759 TMEM230Q96A57 120 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 NARFLQ9H6Q4 476 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 ZNF729A6NN14 1252 aaPredicted RBP18.16■□□□□ 0.5
LINC01960-201ENST00000563759 IGHV4-39P01824 125 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 OMGP23515 440 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 PPP1CCP36873 323 aaKnown RBP18.16■□□□□ 0.5
LINC01960-201ENST00000563759 PIGPP57054 158 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 HTD2P86397 168 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 PHLDA2Q53GA4 152 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 LYG2Q86SG7 212 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 NEIL1Q96FI4 390 aaPredicted RBP18.16■□□□□ 0.5
LINC01960-201ENST00000563759 NEURL2Q9BR09 285 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 RSRP1Q9BUV0 290 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 GNG12Q9UBI6 72 aa18.16■□□□□ 0.5
LINC01960-201ENST00000563759 UBE2J1Q9Y385 318 aaPredicted RBP18.16■□□□□ 0.5
LINC01960-201ENST00000563759 KBTBD11-OT1A0A1B0GTJ5 212 aa18.15■□□□□ 0.5
LINC01960-201ENST00000563759 LUMP51884 338 aaPredicted RBP18.15■□□□□ 0.5
LINC01960-201ENST00000563759 CD276Q5ZPR3 534 aa18.15■□□□□ 0.5
LINC01960-201ENST00000563759 FAM185AQ8N0U4 392 aa18.15■□□□□ 0.5
LINC01960-201ENST00000563759 OR10V1Q8NGI7 309 aa18.15■□□□□ 0.5
LINC01960-201ENST00000563759 ZNF486Q96H40 463 aaPredicted RBP18.15■□□□□ 0.5
LINC01960-201ENST00000563759 GAL3ST2Q9H3Q3 398 aa18.15■□□□□ 0.5
LINC01960-201ENST00000563759 SLC2A9Q9NRM0 540 aa18.15■□□□□ 0.5
LINC01960-201ENST00000563759 CLN8Q9UBY8 286 aa18.15■□□□□ 0.5
LINC01960-201ENST00000563759 JPT1Q9UK76 154 aa18.15■□□□□ 0.5
LINC01960-201ENST00000563759 ANKRD17O75179 2603 aaKnown RBP18.14■□□□□ 0.49
LINC01960-201ENST00000563759 C9orf170A2RU37 121 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 CCNKO75909 580 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 ZNF273Q14593 569 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 C17orf58Q2M2W7 97 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 UXS1Q8NBZ7 420 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 CASTOR1Q8WTX7 329 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 CORO2AQ92828 525 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 PARP12Q9H0J9 701 aaKnown RBP18.14■□□□□ 0.49
LINC01960-201ENST00000563759 TEX13DA0A0J9YY54 714 aaPredicted RBP18.14■□□□□ 0.49
LINC01960-201ENST00000563759 F2RL2O00254 374 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 CGB3P0DN86 165 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 CGB7P0DN87 165 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 FCN2Q15485 313 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 CCDC71LQ8N9Z2 235 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 NRGNQ92686 78 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 ZNF714Q96N38 554 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 KCNS2Q9ULS6 477 aa18.14■□□□□ 0.49
LINC01960-201ENST00000563759 HSD17B6O14756 317 aa18.13■□□□□ 0.49
LINC01960-201ENST00000563759 GNRHRP30968 328 aa18.13■□□□□ 0.49
LINC01960-201ENST00000563759 ZNF787Q6DD87 383 aa18.13■□□□□ 0.49
LINC01960-201ENST00000563759 FAM53AQ6NSI3 398 aaPredicted RBP18.13■□□□□ 0.49
LINC01960-201ENST00000563759 RTN4IP1Q8WWV3 396 aaPredicted RBP18.13■□□□□ 0.49
LINC01960-201ENST00000563759 TAS2R3Q9NYW6 316 aa18.13■□□□□ 0.49
LINC01960-201ENST00000563759 CELSR2Q9HCU4 2923 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 TRBV23-1A0A0A0MS06 115 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 A8MV72 311 aaPredicted RBP18.12■□□□□ 0.49
LINC01960-201ENST00000563759 GPR31O00270 319 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 OR8U9P0C7N5 309 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 DHODHQ02127 395 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 TMEM200BQ69YZ2 307 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 ZNF841Q6ZN19 808 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 ZNF818PQ6ZRF7 136 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 SGPP2Q8IWX5 399 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 CMTM1Q8IZ96 169 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 OR8U1Q8NH10 309 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 CCL28Q9NRJ3 127 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 PTPN13Q12923 2485 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 CRYM-AS1A6NIL9 109 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 GPR37O15354 613 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 WNT2P09544 360 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 CD34P28906 385 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 PDLIM4P50479 330 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 ATP5J2P56134 94 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 CD83Q01151 205 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 CD300CQ08708 224 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 SLC9A3R2Q15599 337 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 C11orf88Q6PI97 169 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 LDLRAD3Q86YD5 345 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 C12orf45Q8N5I9 185 aaPredicted RBP18.12■□□□□ 0.49
LINC01960-201ENST00000563759 PHB2Q99623 299 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 TOLLIPQ9H0E2 274 aa18.12■□□□□ 0.49
LINC01960-201ENST00000563759 PATZ1Q9HBE1 687 aaKnown RBP18.12■□□□□ 0.49
LINC01960-201ENST00000563759 BARX1Q9HBU1 254 aaPredicted RBP18.12■□□□□ 0.49
LINC01960-201ENST00000563759 RGS11O94810 467 aa18.11■□□□□ 0.49
LINC01960-201ENST00000563759 SFT2D2O95562 160 aa18.11■□□□□ 0.49
LINC01960-201ENST00000563759 DUS4LO95620 317 aaKnown RBP18.11■□□□□ 0.49
LINC01960-201ENST00000563759 CCL3L1P16619 93 aa18.11■□□□□ 0.49
LINC01960-201ENST00000563759 S100GP29377 79 aa18.11■□□□□ 0.49
LINC01960-201ENST00000563759 LOXL3P58215 753 aa18.11■□□□□ 0.49
LINC01960-201ENST00000563759 SUPT4H1P63272 117 aaKnown RBP18.11■□□□□ 0.49
LINC01960-201ENST00000563759 WDR25Q64LD2 544 aaPredicted RBP18.11■□□□□ 0.49
LINC01960-201ENST00000563759 OR11H7Q8NGC8 314 aa18.11■□□□□ 0.49
LINC01960-201ENST00000563759 EDARADDQ8WWZ3 215 aa18.11■□□□□ 0.49
LINC01960-201ENST00000563759 IDI2-AS1Q9NZ38 188 aa18.11■□□□□ 0.49
LINC01960-201ENST00000563759 GCN1Q92616 2671 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms