RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 KIAA1324LA8MWY0 1029 aaPredicted RBP14.09□□□□□ -0.15
TPM1-228ENST00000560975 H0Y980 276 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 SYNGR2O43760 224 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 BMP5P22003 454 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 CRYGSP22914 178 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 OR10J1P30954 320 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 PSMB3P49720 205 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 FUT6P51993 359 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 MRPS21P82921 87 aaKnown RBP14.09□□□□□ -0.15
TPM1-228ENST00000560975 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.09□□□□□ -0.15
TPM1-228ENST00000560975 AGMATQ9BSE5 352 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 GPR27Q9NS67 375 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 RNF150Q9ULK6 438 aa14.09□□□□□ -0.15
TPM1-228ENST00000560975 A0A0U1RQK1 487 aa14.08□□□□□ -0.15
TPM1-228ENST00000560975 ZNF320A2RRD8 509 aa14.08□□□□□ -0.15
TPM1-228ENST00000560975 LILRA1O75019 489 aa14.08□□□□□ -0.15
TPM1-228ENST00000560975 F2RP25116 425 aa14.08□□□□□ -0.15
TPM1-228ENST00000560975 ARSJQ5FYB0 599 aaPredicted RBP14.08□□□□□ -0.15
TPM1-228ENST00000560975 TOMM20LQ6UXN7 152 aa14.08□□□□□ -0.15
TPM1-228ENST00000560975 OR10V1Q8NGI7 309 aa14.08□□□□□ -0.15
TPM1-228ENST00000560975 PSMG3Q9BT73 122 aaPredicted RBP14.08□□□□□ -0.15
TPM1-228ENST00000560975 TRAPPC1Q9Y5R8 145 aa14.08□□□□□ -0.15
TPM1-228ENST00000560975 CD300LBA8K4G0 201 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 SELEP16581 610 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 ZNF16P17020 682 aaPredicted RBP14.08□□□□□ -0.16
TPM1-228ENST00000560975 EGR1P18146 543 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 BCL3P20749 454 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 GCH1P30793 250 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 DMRTA1Q5VZB9 504 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 OR1F12Q8NHA8 337 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 WDR61Q9GZS3 305 aaKnown RBP14.08□□□□□ -0.16
TPM1-228ENST00000560975 PARD6AQ9NPB6 346 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 G3V3Y1 287 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 SYNGR3O43761 229 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 B4GALT1P15291 398 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 IL3RAP26951 378 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 CCR5P51681 352 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 SERF2P84101 59 aa14.08□□□□□ -0.16
TPM1-228ENST00000560975 CISD2Q8N5K1 135 aaKnown RBP14.08□□□□□ -0.16
TPM1-228ENST00000560975 OPN3Q9H1Y3 402 aaPredicted RBP14.08□□□□□ -0.16
TPM1-228ENST00000560975 C1QTNF9BB2RNN3 333 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 C3orf80F5H4A9 247 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 GGCTO75223 188 aaKnown RBP14.07□□□□□ -0.16
TPM1-228ENST00000560975 PDGFBP01127 241 aaPredicted RBP14.07□□□□□ -0.16
TPM1-228ENST00000560975 DEFA4P12838 97 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 ZNF32P17041 273 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 DRD1P21728 446 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 ZNF573Q86YE8 665 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 ZDHHC23Q8IYP9 409 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 GRIFINA4D1Z8 144 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 RPS16P62249 146 aaKnown RBP14.07□□□□□ -0.16
TPM1-228ENST00000560975 HBG1P69891 147 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 HBG2P69892 147 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 PMP22Q01453 160 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 Q6ZS52 159 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 CENPVQ7Z7K6 275 aaPredicted RBP14.07□□□□□ -0.16
TPM1-228ENST00000560975 CHRNA10Q9GZZ6 450 aa14.07□□□□□ -0.16
TPM1-228ENST00000560975 TFPI2P48307 235 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 RAET1LQ5VY80 246 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 ACSM6Q6P461 480 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 TCF23Q7RTU1 214 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 TAF15Q92804 592 aaKnown RBP eCLIP14.06□□□□□ -0.16
TPM1-228ENST00000560975 RASL10BQ96S79 203 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 IL36GQ9NZH8 169 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 CD207Q9UJ71 328 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 PAM16Q9Y3D7 125 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 PAGE4O60829 102 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 TUSC2O75896 110 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 FAM27BQ5VT28 67 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 TMEM42Q69YG0 159 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 KCNIP4Q6PIL6 250 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 IL1F10Q8WWZ1 152 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 PINX1Q96BK5 328 aaKnown RBP14.06□□□□□ -0.16
TPM1-228ENST00000560975 ANAPC16Q96DE5 110 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 ERRFI1Q9UJM3 462 aaPredicted RBP14.06□□□□□ -0.16
TPM1-228ENST00000560975 MMP17Q9ULZ9 603 aa14.06□□□□□ -0.16
TPM1-228ENST00000560975 IGHV1OR21-1A0A087WYE8 117 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 LOC102725191A0A1B0GVB3 256 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 FOXL2NBQ6ZUU3 175 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 ALKBH3Q96Q83 286 aaPredicted RBP14.05□□□□□ -0.16
TPM1-228ENST00000560975 LPAR2Q9HBW0 351 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 MANBALQ9NQG1 85 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 SLC38A11Q08AI6 406 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 ZNF501Q96CX3 271 aaPredicted RBP14.05□□□□□ -0.16
TPM1-228ENST00000560975 ESPL1Q14674 2120 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 hCG_38984A0A1B0GV85 526 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 TMEM250H0YL14 139 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 M0QZK8 103 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 TP53I11O14683 189 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 IGKV1-39P01597 117 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 IGKV1D-39P04432 117 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 SRP14P37108 136 aaKnown RBP14.05□□□□□ -0.16
TPM1-228ENST00000560975 TNFSF10P50591 281 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 FGFBP3Q8TAT2 258 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 UBALD1Q8TB05 177 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 ZCCHC14Q8WYQ9 949 aaKnown RBP14.05□□□□□ -0.16
TPM1-228ENST00000560975 PPP1R3CQ9UQK1 317 aa14.05□□□□□ -0.16
TPM1-228ENST00000560975 MRPS18CQ9Y3D5 142 aaKnown RBP14.05□□□□□ -0.16
TPM1-228ENST00000560975 NAPSAO96009 420 aa14.04□□□□□ -0.16
TPM1-228ENST00000560975 CRYAAP02489 173 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms