RNA–Protein interactions for RNA: ENST00000560494.1

SLTM-222, Transcript of SAFB like transcription modulator, human

TSL 3

Gene SLTM, Length 674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-222	ENST00000560494	PPP1R3C	Q9UQK1	317 aa		10.79	□□□□□ -0.68
SLTM-222	ENST00000560494	SESN1	Q9Y6P5	492 aa		10.79	□□□□□ -0.68
SLTM-222	ENST00000560494	CUL9	Q8IWT3	2517 aa		10.79	□□□□□ -0.68
SLTM-222	ENST00000560494		A0A1B0GU03	582 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	ODAM	A1E959	279 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494		B9A039	149 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	C12orf77	C9JDV5	145 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	HSD17B6	O14756	317 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	ZNF737	O75373	536 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	LY86	O95711	162 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	HBZ	P02008	142 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	APOBEC3A	P31941	199 aa	Predicted RBP	10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	RAB7A	P51149	207 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	P2RX3	P56373	397 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	PRR20E	P86478	221 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	PRR20C	P86479	221 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	PRR20D	P86480	221 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	PRR20B	P86481	221 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	PRR20A	P86496	221 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	TEX36	Q5VZQ5	186 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	MEX3B	Q6ZN04	569 aa	Known RBP	10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	ZNF66	Q6ZN08	573 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	FAM219A	Q8IW50	185 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	PDZD9	Q8IXQ8	264 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	SLC35G3	Q8N808	338 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	C14orf79	Q96F83	325 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	COQ2	Q96H96	371 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	TP53RK	Q96S44	253 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	HSD17B10	Q99714	261 aa	Known RBP	10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	RNF126	Q9BV68	326 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	GCM1	Q9NP62	436 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	DYNLRB1	Q9NP97	96 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	PFDN2	Q9UHV9	154 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	KCNS2	Q9ULS6	477 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	POMT1	Q9Y6A1	747 aa		10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	PTPRZ1	P23471	2315 aa	Predicted RBP	10.78	□□□□□ -0.68
SLTM-222	ENST00000560494	TRGV10	A0A0A0MS01	117 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	IGKV1D-13	A0A0B4J2D9	117 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	NDUFA2	O43678	99 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	JTB	O76095	146 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	FSTL3	O95633	263 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	GAPDH	P04406	335 aa	Known RBP	10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	IGKV1-13	P0DP09	117 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	ARHGDIB	P52566	201 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	TLE1	Q04724	770 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	AES	Q08117	197 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	MSMP	Q1L6U9	139 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	SP6	Q3SY56	376 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	STUM	Q69YW2	141 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	SELENOH	Q8IZQ5	122 aa	Known RBP	10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	PRR18	Q8N4B5	295 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	CD177	Q8N6Q3	437 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	OR10A7	Q8NGE5	316 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	ANGPTL6	Q8NI99	470 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	RNASE11	Q8TAA1	199 aa	Known RBP	10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	RAB39B	Q96DA2	213 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	RRNAD1	Q96FB5	475 aa	Known RBP	10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	CYYR1	Q96J86	154 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	WFIKKN1	Q96NZ8	548 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	SLC25A31	Q9H0C2	315 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	SAP30L	Q9HAJ7	183 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	KCNJ16	Q9NPI9	418 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	AUP1	Q9Y679	476 aa		10.77	□□□□□ -0.69
SLTM-222	ENST00000560494	URB1	O60287	2271 aa	Known RBP	10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	CHD3	Q12873	2000 aa	Known RBP	10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	IGKV1D-17	A0A075B6S4	117 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	NUDT19	A8MXV4	375 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	WRB	O00258	174 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	GPR137B	O60478	399 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	YPEL1	O60688	119 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	RPL12	P30050	165 aa	Known RBP	10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	NKX2-1	P43699	371 aa	Predicted RBP	10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	MEF2C	Q06413	473 aa	Predicted RBP	10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	LYZL2	Q7Z4W2	148 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	BAP18	Q8IXM2	172 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	SLC7A5P1	Q8MH63	180 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	OR4D5	Q8NGN0	318 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	OR1S1	Q8NH92	325 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	CA5BP1	Q8WTZ4	195 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	ARL11	Q969Q4	196 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	YPEL2	Q96QA6	119 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	OR2S2	Q9NQN1	319 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	OR1A1	Q9P1Q5	309 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	GAB2	Q9UQC2	676 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	RNF115	Q9Y4L5	304 aa		10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	HEATR1	Q9H583	2144 aa	Known RBP	10.76	□□□□□ -0.69
SLTM-222	ENST00000560494	IGHV3-64D	A0A0J9YX35	117 aa		10.75	□□□□□ -0.69
SLTM-222	ENST00000560494	ZNF729	A6NN14	1252 aa	Predicted RBP	10.75	□□□□□ -0.69
SLTM-222	ENST00000560494	FAM90A26	D6RGX4	464 aa		10.75	□□□□□ -0.69
SLTM-222	ENST00000560494	LGALS8	O00214	317 aa		10.75	□□□□□ -0.69
SLTM-222	ENST00000560494	F2RL2	O00254	374 aa		10.75	□□□□□ -0.69
SLTM-222	ENST00000560494	SPDEF	O95238	335 aa		10.75	□□□□□ -0.69
SLTM-222	ENST00000560494	SCGB1D2	O95969	90 aa		10.75	□□□□□ -0.69
SLTM-222	ENST00000560494	OR8U9	P0C7N5	309 aa		10.75	□□□□□ -0.69
SLTM-222	ENST00000560494	C1QTNF9	P0C862	333 aa		10.75	□□□□□ -0.69
SLTM-222	ENST00000560494	AGA	P20933	346 aa		10.75	□□□□□ -0.69
SLTM-222	ENST00000560494	KIR2DS2	P43631	304 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms