RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 OR51T1Q8NGJ9 327 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 FAM110DQ8TAY7 271 aaPredicted RBP11.02□□□□□ -0.65
SMAD3-214ENST00000560402 MRPS24Q96EL2 167 aaKnown RBP11.02□□□□□ -0.65
SMAD3-214ENST00000560402 NPFFR1Q9GZQ6 430 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 C20orf85Q9H1P6 137 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 MED28Q9H204 178 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 C19orf12Q9NSK7 152 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 SCP2D1Q9UJQ7 156 aa11.02□□□□□ -0.65
SMAD3-214ENST00000560402 RFPL4AA6NLU0 287 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 RFPL4AL1F8VTS6 287 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 RAB27BO00194 218 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 PLXNB1O43157 2135 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 RAB3DO95716 219 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 OPN1MWP04001 364 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 OPN1MW2P0DN77 364 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 OPN1MW3P0DN78 364 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 HIST1H1DP16402 221 aaKnown RBP11.01□□□□□ -0.65
SMAD3-214ENST00000560402 MGMTP16455 207 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 SERPINA2P20848 420 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 HAAOP46952 286 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 RRAS2P62070 204 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-214ENST00000560402 MRPS15P82914 257 aaKnown RBP11.01□□□□□ -0.65
SMAD3-214ENST00000560402 ARFRP1Q13795 201 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 ZNF260Q3ZCT1 412 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 RNASE10Q5GAN6 216 aaKnown RBP11.01□□□□□ -0.65
SMAD3-214ENST00000560402 CRIP3Q6Q6R5 217 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 TRAPPC6BQ86SZ2 158 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 MKXQ8IYA7 352 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 PXT1Q8NFP0 134 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 CCDC107Q8WV48 283 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 CFHR4Q92496 578 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 NKX3-1Q99801 234 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-214ENST00000560402 LPAR5Q9H1C0 372 aa11.01□□□□□ -0.65
SMAD3-214ENST00000560402 C7orf66A4D0T2 115 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 TMEM235A6NFC5 223 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 SERPINE3A8MV23 424 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 CA11O75493 328 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 NDUFB6O95139 128 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 NXPH2O95156 264 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 RBP4P02753 201 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 MPZP25189 248 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 PRDX2P32119 198 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 CCR6P51684 374 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 LGALS4P56470 323 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 LY6EQ16553 131 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 ZFP69Q49AA0 526 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 SAXO1Q8IYX7 474 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 CD177Q8N6Q3 437 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 KLHDC1Q8N7A1 406 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 OR5D18Q8NGL1 313 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 OR4C16Q8NGL9 310 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 C17orf50Q8WW18 174 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 AJUBAQ96IF1 538 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 PRRT1Q99946 306 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 NRIP2Q9BQI9 281 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 SLC25A21Q9BQT8 299 aaPredicted RBP11□□□□□ -0.65
SMAD3-214ENST00000560402 TM2D1Q9BX74 207 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 SELENOIQ9C0D9 397 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 BANF2Q9H503 90 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 HES4Q9HCC6 221 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11□□□□□ -0.65
SMAD3-214ENST00000560402 IL36GQ9NZH8 169 aa11□□□□□ -0.65
SMAD3-214ENST00000560402 TBL2Q9Y4P3 447 aaKnown RBP11□□□□□ -0.65
SMAD3-214ENST00000560402 PQLC2LA1A4F0 135 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 UBE2QL1A1L167 161 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 SYNGR1O43759 233 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 HTR3BO95264 441 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 TK1P04183 234 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 IFNA6P05013 189 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 PTHLHP12272 177 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 TMEM200BQ69YZ2 307 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 C1QL4Q86Z23 238 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 FAM89BQ8N5H3 189 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 C11orf42Q8N5U0 333 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 PPP1R35Q8TAP8 253 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 PKIBQ9C010 78 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 OR51J1Q9H342 316 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 PITPNC1Q9UKF7 332 aa10.99□□□□□ -0.65
SMAD3-214ENST00000560402 FAM90A8PA6NJQ4 464 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 C17orf98A8MV24 154 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 ARPC1BO15143 372 aaKnown RBP10.98□□□□□ -0.65
SMAD3-214ENST00000560402 SSNA1O43805 119 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 AMY2AP04746 511 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 GNB3P16520 340 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 BLVRBP30043 206 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-214ENST00000560402 ZP1P60852 638 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 IL24Q13007 206 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 CBX3Q13185 183 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 ZNF273Q14593 569 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 BEAN1Q3B7T3 259 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 MOGAT2Q3SYC2 334 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 KPRPQ5T749 579 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-214ENST00000560402 REC114Q7Z4M0 266 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 TMEM17Q86X19 198 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 TMEM104Q8NE00 496 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 OR6F1Q8NGZ6 308 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 GIMAP1Q8WWP7 306 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 ZNF488Q96MN9 340 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 GINS4Q9BRT9 223 aa10.98□□□□□ -0.65
SMAD3-214ENST00000560402 TCF19Q9Y242 345 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms