RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 GOLGA7BQ2TAP0 167 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 LINC00303Q3SY05 128 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 SCGB2B2Q4G0G5 96 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 COA6Q5JTJ3 125 aaKnown RBP2.09□□□□□ -2.07
VPS13C-208ENST00000559119 LY6G6FQ5SQ64 297 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 NCMAPQ5T1S8 102 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 AKR1C8PQ5T2L2 129 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 C1orf194Q5T5A4 169 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 C1orf94Q6P1W5 598 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 FAHD2BQ6P2I3 314 aaPredicted RBP2.09□□□□□ -2.07
VPS13C-208ENST00000559119 DEGS2Q6QHC5 323 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 WDR74Q6RFH5 385 aaPredicted RBP2.09□□□□□ -2.07
VPS13C-208ENST00000559119 ZNF322Q6U7Q0 402 aaPredicted RBP2.09□□□□□ -2.07
VPS13C-208ENST00000559119 CD300LGQ6UXG3 332 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 UNQ9370/PRO34162Q6UXP9 181 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 SLC35D2Q76EJ3 337 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 SSX6Q7RTT6 188 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 HMGN2P46Q86SG4 172 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 TRAPPC5Q8IUR0 188 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 DEFB106AQ8N104 65 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 MTURNQ8N3F0 131 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 KRTCAP2Q8N6L1 136 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 ZNF321PQ8N8H1 164 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 ACBD4Q8NC06 268 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 OR7G2Q8NG99 324 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 OR4K5Q8NGD3 323 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 OR10AD1Q8NGE0 317 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 OR56B2PQ8NGI1 322 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 OR51G2Q8NGK0 314 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 OR5D16Q8NGK9 328 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 OR5AK2Q8NH90 309 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 IL1F10Q8WWZ1 152 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 ING5Q8WYH8 240 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 OR8D1Q8WZ84 308 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 TNFRSF14Q92956 283 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 ZNF707Q96C28 371 aaPredicted RBP2.09□□□□□ -2.07
VPS13C-208ENST00000559119 CXorf40BQ96DE9 158 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 SDSLQ96GA7 329 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 FAHD2AQ96GK7 314 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 SLC41A3Q96GZ6 507 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 TPD52L3Q96J77 140 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 CNN2Q99439 309 aaKnown RBP2.09□□□□□ -2.07
VPS13C-208ENST00000559119 SULT4A1Q9BR01 284 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 ADAT1Q9BUB4 502 aaKnown RBP2.09□□□□□ -2.07
VPS13C-208ENST00000559119 ZNF471Q9BX82 626 aaPredicted RBP2.09□□□□□ -2.07
VPS13C-208ENST00000559119 MRPL13Q9BYD1 178 aaKnown RBP2.09□□□□□ -2.07
VPS13C-208ENST00000559119 RAB33BQ9H082 229 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 COMMD4Q9H0A8 199 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 ATG5Q9H1Y0 275 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 OR2AG1Q9H205 316 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 TMEM185BQ9H7F4 350 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 KIR3DX1Q9H7L2 352 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 TPT1P8Q9HAU6 139 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 RDH14Q9HBH5 336 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 ADAP2Q9NPF8 381 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 ASF1BQ9NVP2 202 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 TVP23BQ9NYZ1 205 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 DNAJC27Q9NZQ0 273 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 VAX2Q9UIW0 290 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 PITPNC1Q9UKF7 332 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 OR52A1Q9UKL2 312 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 FLVCR2Q9UPI3 526 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 ZFP30Q9Y2G7 519 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 YARS2Q9Y2Z4 477 aaKnown RBP2.09□□□□□ -2.07
VPS13C-208ENST00000559119 STARD10Q9Y365 291 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 OR10H1Q9Y4A9 318 aa2.09□□□□□ -2.07
VPS13C-208ENST00000559119 PUS1Q9Y606 427 aaKnown RBP eCLIP2.09□□□□□ -2.07
VPS13C-208ENST00000559119 ZNF638Q14966 1978 aaKnown RBP2.09□□□□□ -2.08
VPS13C-208ENST00000559119 NRXN2Q9P2S2 1712 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 GBF1Q92538 1859 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 TVP23AA6NH52 213 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 FAM183AA6NL82 134 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 ZNF726A6NNF4 738 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 ZNF705EA8MWA4 302 aaPredicted RBP2.08□□□□□ -2.08
VPS13C-208ENST00000559119 B4DEV8 164 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 PPP5D1E7EU14 171 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 K7EQM0 130 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 M0R129 80 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 RRP8O43159 456 aaKnown RBP2.08□□□□□ -2.08
VPS13C-208ENST00000559119 HIST1H2BKO60814 126 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 MTX2O75431 263 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 ARL6IP5O75915 188 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 SCGNO76038 276 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 FGF1P05230 155 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 HIST1H2BJP06899 126 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 CTSLP07711 333 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 UCHL1P09936 223 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 RD3LP0DJH9 198 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 OR5H8P0DN80 308 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 GZMBP10144 247 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 CELP19835 753 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 HIST1H2BOP23527 126 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 CD82P27701 267 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 PSMB6P28072 239 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 OR1E1P30953 314 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 GDI1P31150 447 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 HIST1H2BBP33778 126 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 IFNGR2P38484 337 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 TNFSF9P41273 254 aa2.08□□□□□ -2.08
VPS13C-208ENST00000559119 PPICP45877 212 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms