RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 SSX5O60225 188 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 HLA-DQB1P01920 261 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 SCTP09683 121 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 PTHLHP12272 177 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 UTF1Q5T230 341 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 STEAP3Q658P3 488 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 BEND2Q8NDZ0 799 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 OR52L2PQ8NGH6 319 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 OR10V1Q8NGI7 309 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 ZNF418Q8TF45 676 aaPredicted RBP11.51□□□□□ -0.57
SNX6-206ENST00000556162 ZDHHC16Q969W1 377 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 MMP27Q9H306 513 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 JPT1Q9UK76 154 aa11.51□□□□□ -0.57
SNX6-206ENST00000556162 TBL2Q9Y4P3 447 aaKnown RBP11.51□□□□□ -0.57
SNX6-206ENST00000556162 A6NHS1 94 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 J3QR06 171 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 FABP7O15540 132 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 RGS11O94810 467 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 IGLV1-47P01700 117 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 FBP1P09467 338 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 HTR1DP28221 377 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 PRSS3P35030 304 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 CBX5P45973 191 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 GNG10P50151 68 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 DEFB112Q30KQ8 113 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 Q3ZCU0 254 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 Q6ZS49 121 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 OR4A4PQ8NGN8 299 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 CREB3L1Q96BA8 519 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 DIRAS2Q96HU8 199 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 OCSTAMPQ9BR26 566 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 BATF3Q9NR55 127 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 A3GALT2U3KPV4 340 aa11.5□□□□□ -0.57
SNX6-206ENST00000556162 HSPA12AO43301 675 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 GSTT2P0CG29 244 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 GSTT2BP0CG30 244 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 ZBTB25P24278 435 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 MADCAM1Q13477 382 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 MORN2Q502X0 79 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 MINOS1Q5TGZ0 78 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 CNIH2Q6PI25 160 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 SNX29P2Q8IUI4 249 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 SIGLECL1Q8N7X8 197 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 OR4P4Q8NGL7 312 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 C15orf40Q8WUR7 153 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 MALSU1Q96EH3 234 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 MMP28Q9H239 520 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 SLC23A1Q9UHI7 598 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 MINOS1-NBL1R4GNA1 71 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 JMJD1CQ15652 2540 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 YPEL1O60688 119 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 TPPPO94811 219 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 S100A5P33763 92 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 HLA-DRB5Q30154 266 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 FAM53AQ6NSI3 398 aaPredicted RBP11.49□□□□□ -0.57
SNX6-206ENST00000556162 LHFPL4Q7Z7J7 247 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 C8orf31Q8N9H6 132 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 OR10X1Q8NGY0 326 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 ZNF48Q96MX3 618 aaPredicted RBP11.49□□□□□ -0.57
SNX6-206ENST00000556162 YPEL2Q96QA6 119 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 DPM3Q9P2X0 92 aa11.49□□□□□ -0.57
SNX6-206ENST00000556162 AMMECR1Q9Y4X0 333 aaPredicted RBP11.49□□□□□ -0.57
SNX6-206ENST00000556162 MDFIC2A0A1B0GVS7 189 aa11.48□□□□□ -0.57
SNX6-206ENST00000556162 A0A1W2PPE3 182 aa11.48□□□□□ -0.57
SNX6-206ENST00000556162 LEUTXA8MZ59 168 aa11.48□□□□□ -0.57
SNX6-206ENST00000556162 BUB1B-PAK6H3BSN5 160 aa11.48□□□□□ -0.57
SNX6-206ENST00000556162 PPP1CCP36873 323 aaKnown RBP11.48□□□□□ -0.57
SNX6-206ENST00000556162 CEACAM3P40198 252 aa11.48□□□□□ -0.57
SNX6-206ENST00000556162 CEACAM6P40199 344 aa11.48□□□□□ -0.57
SNX6-206ENST00000556162 GNMTQ14749 295 aa11.48□□□□□ -0.57
SNX6-206ENST00000556162 TUSC1Q2TAM9 212 aa11.48□□□□□ -0.57
SNX6-206ENST00000556162 HOGA1Q86XE5 327 aa11.48□□□□□ -0.57
SNX6-206ENST00000556162 LINC00311Q8N616 119 aa11.48□□□□□ -0.57
SNX6-206ENST00000556162 C17orf50Q8WW18 174 aa11.48□□□□□ -0.57
SNX6-206ENST00000556162 GCDHQ92947 438 aaPredicted RBP11.48□□□□□ -0.57
SNX6-206ENST00000556162 PRDM13Q9H4Q3 707 aa11.48□□□□□ -0.57
SNX6-206ENST00000556162 IGKV1D-8A0A087WSZ0 117 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 IGKV1-6A0A0C4DH72 117 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 BET1O15155 118 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 TCF21O43680 179 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 TNFSF8P32971 234 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 SSX2Q16385 188 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 IGSF11Q5DX21 431 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 LY6G6FQ5SQ64 297 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 GVQW1Q8N7I0 195 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 BEST4Q8NFU0 473 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 OR10J5Q8NHC4 309 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 AJUBAQ96IF1 538 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 JMJD8Q96S16 334 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 SCPEP1Q9HB40 452 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 IFT46Q9NQC8 304 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 ZNRD1Q9P1U0 126 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 RABL2AQ9UBK7 228 aaPredicted RBP11.47□□□□□ -0.57
SNX6-206ENST00000556162 ANXA10Q9UJ72 324 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 RABL2BQ9UNT1 228 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 HILPDAQ9Y5L2 63 aa11.47□□□□□ -0.57
SNX6-206ENST00000556162 A0A0A6YYJ9 748 aa11.46□□□□□ -0.57
SNX6-206ENST00000556162 MEIS3P1A6NDR6 274 aa11.46□□□□□ -0.57
SNX6-206ENST00000556162 SULT1C2O00338 296 aa11.46□□□□□ -0.57
SNX6-206ENST00000556162 DIRAS3O95661 229 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms