RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.28□□□□□ -0.44
VPS33B-205ENST00000556096 HBZP02008 142 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 PET100P0DJ07 73 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 IRF2P14316 349 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 MUC1P15941 1255 aaPredicted RBP12.28□□□□□ -0.44
VPS33B-205ENST00000556096 GZMHP20718 246 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 UCP1P25874 307 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 GRNP28799 593 aaKnown RBP12.28□□□□□ -0.44
VPS33B-205ENST00000556096 IL2RGP31785 369 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 APOBEC3AP31941 199 aaPredicted RBP12.28□□□□□ -0.44
VPS33B-205ENST00000556096 EFNB3Q15768 340 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 ESCO2Q56NI9 601 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 ZNF561Q8N587 486 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 OR5D13Q8NGL4 314 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 OR1L1Q8NH94 360 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 LINC01560Q8TB33 94 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 ITLN2Q8WWU7 325 aaPredicted RBP12.28□□□□□ -0.44
VPS33B-205ENST00000556096 SDSLQ96GA7 329 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 EGLN1Q9GZT9 426 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 DNTTIP1Q9H147 329 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 KCNJ16Q9NPI9 418 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 UBE2J1Q9Y385 318 aaPredicted RBP12.28□□□□□ -0.44
VPS33B-205ENST00000556096 ADGRG4Q8IZF6 3080 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 DUXBA0A1W2PPF3 345 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 RNF222A6NCQ9 220 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 H0Y980 276 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 H0YIZ8 118 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 RP2O75695 350 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 CD80P33681 288 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 BEX5Q5H9J7 111 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 TEX36Q5VZQ5 186 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 STUMQ69YW2 141 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 LYZL2Q7Z4W2 148 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 INO80EQ8NBZ0 244 aaPredicted RBP12.28□□□□□ -0.44
VPS33B-205ENST00000556096 OR13A1Q8NGR1 328 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 LHFPL5Q8TAF8 219 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 MRGPRDQ8TDS7 321 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 GSKIPQ9P0R6 139 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 MAB21L2Q9Y586 359 aa12.28□□□□□ -0.44
VPS33B-205ENST00000556096 PIGBOS1A0A0B4J2F0 54 aa12.27□□□□□ -0.45
VPS33B-205ENST00000556096 A1L4Q6 167 aa12.27□□□□□ -0.45
VPS33B-205ENST00000556096 CDS2O95674 445 aa12.27□□□□□ -0.45
VPS33B-205ENST00000556096 CYB5R3P00387 301 aaPredicted RBP12.27□□□□□ -0.45
VPS33B-205ENST00000556096 F2RP25116 425 aa12.27□□□□□ -0.45
VPS33B-205ENST00000556096 CCL8P80075 99 aa12.27□□□□□ -0.45
VPS33B-205ENST00000556096 HTD2P86397 168 aa12.27□□□□□ -0.45
VPS33B-205ENST00000556096 RAB32Q13637 225 aa12.27□□□□□ -0.45
VPS33B-205ENST00000556096 EXOSC2Q13868 293 aaKnown RBP12.27□□□□□ -0.45
VPS33B-205ENST00000556096 SNTB1Q13884 538 aaKnown RBP12.27□□□□□ -0.45
VPS33B-205ENST00000556096 SLC51BQ86UW2 128 aa12.27□□□□□ -0.45
VPS33B-205ENST00000556096 SLC7A5P1Q8MH63 180 aa12.27□□□□□ -0.45
VPS33B-205ENST00000556096 UBALD1Q8TB05 177 aa12.27□□□□□ -0.45
VPS33B-205ENST00000556096 IL22RA2Q969J5 263 aa12.27□□□□□ -0.45
VPS33B-205ENST00000556096 MS4A5Q9H3V2 200 aa12.27□□□□□ -0.45
VPS33B-205ENST00000556096 COL12A1Q99715 3063 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 ODAMA1E959 279 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 LRRC30A6NM36 301 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 B9A039 149 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 C15orf65H3BRN8 121 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 SPINT2O43291 252 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 CFDP00746 253 aaPredicted RBP12.26□□□□□ -0.45
VPS33B-205ENST00000556096 IGLV2-14P01704 120 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 HTR2BP41595 481 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 AP2S1P53680 142 aaPredicted RBP12.26□□□□□ -0.45
VPS33B-205ENST00000556096 MSMO1Q15800 293 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 FAM201AQ5SY85 155 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 TMEM268Q5VZI3 342 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 ZNF695Q8IW36 515 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 SELENOHQ8IZQ5 122 aaKnown RBP12.26□□□□□ -0.45
VPS33B-205ENST00000556096 TPRX1Q8N7U7 411 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 ZBTB34Q8NCN2 500 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 ZNRF1Q8ND25 227 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 DCUN1D4Q92564 292 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 ARL11Q969Q4 196 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 FAM234AQ9H0X4 552 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 UBQLN2Q9UHD9 624 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 RNF115Q9Y4L5 304 aa12.26□□□□□ -0.45
VPS33B-205ENST00000556096 RBM7Q9Y580 266 aaKnown RBP12.26□□□□□ -0.45
VPS33B-205ENST00000556096 UTP20O75691 2785 aaKnown RBP12.26□□□□□ -0.45
VPS33B-205ENST00000556096 OR8U9P0C7N5 309 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 P2RX3P56373 397 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 TFF3Q07654 80 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 EDDM3AQ14507 147 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 MST1LQ2TV78 715 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 MEX3BQ6ZN04 569 aaKnown RBP12.25□□□□□ -0.45
VPS33B-205ENST00000556096 ZNF788Q6ZQV5 615 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 SLC35G3Q8N808 338 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 OR52L2PQ8NGH6 319 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 OR8U1Q8NH10 309 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 FAM216AQ8WUB2 273 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 NEUROG1Q92886 237 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 NINJ1Q92982 152 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 ZNF665Q9H7R5 613 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 SAP30LQ9HAJ7 183 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 ZFP57Q9NU63 452 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 KANTRA0A1W2PQU2 76 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 TUBAL3A6NHL2 446 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 BCL2L11O43521 198 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 RLN2P04090 185 aa12.25□□□□□ -0.45
VPS33B-205ENST00000556096 AGAP20933 346 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms