RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 CRISP1P54107 249 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 STEAP3Q658P3 488 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 UNQ5815/PRO19632Q6UWF5 114 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 PPP1R27Q86WC6 154 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 LAX1Q8IWV1 398 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 DEFB107AQ8IZN7 70 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 PXT1Q8NFP0 134 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 OR10V1Q8NGI7 309 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 OR51A4Q8NGJ6 313 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 OR2G2Q8NGZ5 317 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 ELAC2Q9BQ52 826 aaKnown RBP7.27□□□□□ -1.25
SCFD1-215ENST00000555259 FAM103A1Q9BTL3 118 aaKnown RBP7.27□□□□□ -1.25
SCFD1-215ENST00000555259 MRPL20Q9BYC9 149 aaKnown RBP7.27□□□□□ -1.25
SCFD1-215ENST00000555259 GNG12Q9UBI6 72 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 GNG8Q9UK08 70 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 ADAM30Q9UKF2 790 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 DHDHQ9UQ10 334 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 A0A0J9YWU9 116 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 FCN1O00602 326 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 TFAP2AP05549 437 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 ANXA8P13928 327 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 EFNB1P98172 346 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 PTGES3Q15185 160 aaKnown RBP7.26□□□□□ -1.25
SCFD1-215ENST00000555259 MOGAT2Q3SYC2 334 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 TP53I3Q53FA7 332 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 ZNF691Q5VV52 312 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 FAM220AQ7Z4H9 259 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 DHFR2Q86XF0 187 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 TCEANCQ8N8B7 351 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 LFNGQ8NES3 379 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 OR10H4Q8NGA5 316 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 OR13C3Q8NGS6 347 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 OR2K2Q8NGT1 345 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 OR10K1Q8NGX5 313 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 RDH12Q96NR8 316 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 FBXL15Q9H469 300 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 IFT22Q9H7X7 185 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 FRRS1LQ9P0K9 344 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 SLC23A1Q9UHI7 598 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 GAB2Q9UQC2 676 aa7.26□□□□□ -1.25
SCFD1-215ENST00000555259 C13orf42A0A1B0GVH6 325 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 ZNF785A8K8V0 405 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 GNGT2O14610 69 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 OR7C1O76099 320 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-215ENST00000555259 MT-ND4P03905 459 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 MNAT1P51948 309 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 NANOS3P60323 173 aaKnown RBP7.25□□□□□ -1.25
SCFD1-215ENST00000555259 TNFRSF9Q07011 255 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 TMEM30BQ3MIR4 351 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 CD300EQ496F6 205 aaPredicted RBP7.25□□□□□ -1.25
SCFD1-215ENST00000555259 GID4Q8IVV7 300 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 ODF3L1Q8IXM7 274 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 TMEM163Q8TC26 289 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 PRRG3Q9BZD7 231 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 AIPO00170 330 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 RRHO14718 337 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 MAGEB3O15480 346 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 SPINT2O43291 252 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 SULT1B1O43704 296 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 ALDH3A2P51648 485 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 PRR20EP86478 221 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 PRR20CP86479 221 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 PRR20DP86480 221 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 PRR20BP86481 221 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 PRR20AP86496 221 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 DYRK1AQ13627 763 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 PLGLAQ15195 96 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 RSU1Q15404 277 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 TATDN3Q17R31 274 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 LPCAT4Q643R3 524 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 ZNF497Q6ZNH5 498 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 PRR18Q8N4B5 295 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 TNFAIP8L1Q8WVP5 186 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 KRTAP4-5Q9BYR2 181 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 ZNF355PQ9NSJ1 428 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 WARS2Q9UGM6 360 aaKnown RBP7.25□□□□□ -1.25
SCFD1-215ENST00000555259 ST3GAL6Q9Y274 331 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 HSPG2P98160 4391 aa7.25□□□□□ -1.25
SCFD1-215ENST00000555259 DNAH17Q9UFH2 4485 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 A0A0G2JLM5 398 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 GABRPO00591 440 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 GEMIN2O14893 280 aaKnown RBP7.24□□□□□ -1.25
SCFD1-215ENST00000555259 OR2A4O95047 310 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 NDUFB8O95169 186 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 HTR3BO95264 441 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 TRBV12-3P01733 135 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 HBZP02008 142 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 RBM11P57052 281 aaKnown RBP7.24□□□□□ -1.25
SCFD1-215ENST00000555259 MS4A2Q01362 244 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 ZNF85Q03923 595 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 NHLRC3Q5JS37 347 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 ZNF833PQ6ZTB9 187 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 LYG2Q86SG7 212 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 POC5Q8NA72 575 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 OR1L1Q8NH94 360 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 IL4I1Q96RQ9 567 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 ABHD14AQ9BUJ0 271 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 FAM192AQ9GZU8 254 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 RAB9BQ9NP90 201 aa7.24□□□□□ -1.25
SCFD1-215ENST00000555259 NDE1Q9NXR1 346 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms