RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 TMEM267Q0VDI3 215 aaPredicted RBP3.45□□□□□ -1.86
VRK1-203ENST00000555067 TMEM241Q24JQ0 296 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 LIN52Q52LA3 116 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 C2orf83Q53S99 150 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 YIF1BQ5BJH7 314 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 ALKAL1Q6UXT8 129 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 SMIM15Q7Z3B0 74 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 ATP5L2Q7Z4Y8 100 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 TMED4Q7Z7H5 227 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 TAC4Q86UU9 113 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 CALHM3Q86XJ0 350 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 C1orf158Q8N1D5 194 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 OR5W2Q8NH69 310 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 EXOSC8Q96B26 276 aaKnown RBP3.45□□□□□ -1.86
VRK1-203ENST00000555067 TMA16Q96EY4 203 aaKnown RBP3.45□□□□□ -1.86
VRK1-203ENST00000555067 IMMP1LQ96LU5 166 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 SIGMAR1Q99720 223 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 IFI27L2Q9H2X8 130 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 OR12D3Q9UGF7 316 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 NEU3Q9UQ49 428 aa3.45□□□□□ -1.86
VRK1-203ENST00000555067 LRP4O75096 1905 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 KMT2EQ8IZD2 1858 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 KIF15Q9NS87 1388 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 A0A1B0GUA9 196 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 LOC105371267A0A1B0GV96 52 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 DISC1C4P0D8 188 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 C15orf65H3BRN8 121 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 FBP1P09467 338 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 OR13C7P0DN81 318 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 MAP2K4P45985 399 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 RPS10P46783 165 aaKnown RBP3.44□□□□□ -1.86
VRK1-203ENST00000555067 SNAP25P60880 206 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 RPS24P62847 133 aaKnown RBP3.44□□□□□ -1.86
VRK1-203ENST00000555067 HLA-DRB3P79483 266 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 PSG4Q00888 419 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 LOXL1Q08397 574 aaPredicted RBP3.44□□□□□ -1.86
VRK1-203ENST00000555067 PRDX4Q13162 271 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 JOSD1Q15040 202 aaPredicted RBP3.44□□□□□ -1.86
VRK1-203ENST00000555067 EBPQ15125 230 aaKnown RBP3.44□□□□□ -1.86
VRK1-203ENST00000555067 TEX30Q5JUR7 227 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 ZNF550Q7Z398 422 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 ORMDL3Q8N138 153 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 ZNF567Q8N184 647 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 ZNF676Q8N7Q3 588 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 ZDHHC22Q8N966 263 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 TMEM75Q8N9X5 138 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 OR2Z1Q8NG97 314 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 OR5H2Q8NGV7 314 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 PDXPQ96GD0 296 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 DIRAS2Q96HU8 199 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 ZNF382Q96SR6 550 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 DCSTAMPQ9H295 470 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 TAC3Q9UHF0 121 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 CARHSP1Q9Y2V2 147 aaKnown RBP3.44□□□□□ -1.86
VRK1-203ENST00000555067 PLCH2O75038 1416 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 NPATQ14207 1427 aa3.44□□□□□ -1.86
VRK1-203ENST00000555067 A0A1W2PP18 115 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 C5orf49A4QMS7 147 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 C9JQL5 133 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 K7EPK0 472 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 NOS1APO75052 506 aaPredicted RBP3.43□□□□□ -1.86
VRK1-203ENST00000555067 SCO1O75880 301 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 OR12D1P0DN82 309 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 ESDP10768 282 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 CD79AP11912 226 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 CTSEP14091 401 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 NELFEP18615 380 aaKnown RBP3.43□□□□□ -1.86
VRK1-203ENST00000555067 MARCKSL1P49006 195 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 GZMMP51124 257 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 CTBP2P56545 445 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 FABP5Q01469 135 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 MOGQ16653 247 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 ACOT6Q3I5F7 207 aaPredicted RBP3.43□□□□□ -1.86
VRK1-203ENST00000555067 ABCA11PQ4W5N1 156 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 MORN3Q6PF18 240 aaPredicted RBP3.43□□□□□ -1.86
VRK1-203ENST00000555067 TCF23Q7RTU1 214 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 GLT6D1Q7Z4J2 308 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 YIPF7Q8N8F6 280 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 OR9I1Q8NGQ6 314 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 CIRBP-AS1Q8TBR5 109 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 APOBEC3DQ96AK3 386 aaPredicted RBP3.43□□□□□ -1.86
VRK1-203ENST00000555067 ACY3Q96HD9 319 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 OR7D2Q96RA2 312 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 OR51I2Q9H344 312 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 INIPQ9NRY2 104 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 LINC00527Q9UJ94 153 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 PKIGQ9Y2B9 76 aa3.43□□□□□ -1.86
VRK1-203ENST00000555067 GNG14A0A1W2PPG7 69 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 GMNCA6NCL1 334 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 OR6C6A6NF89 314 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 ARGFXA6NJG6 315 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 EEF1E1-BLOC1S5C9J1V9 151 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 EEF1E1O43324 174 aaKnown RBP3.42□□□□□ -1.86
VRK1-203ENST00000555067 OR2B3O76000 313 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 HLA-DQA1P01909 254 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 MAS1P04201 325 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 OR5G3P0C626 314 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 OR56A5P0C7T3 313 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 ZNF806P0C7X5 589 aa3.42□□□□□ -1.86
VRK1-203ENST00000555067 GTF2F2P13984 249 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms