RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TMEM30CPA0ZSE6 113 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 NKX2-6A6NCS4 301 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 C12orf77C9JDV5 145 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 CCL21O00585 134 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 MPPED1O15442 326 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 SPRY3O43610 288 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 CFDP00746 253 aaPredicted RBP7.43□□□□□ -1.22
TDP1-210ENST00000554976 PRDX2P32119 198 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 FXYD4P59646 89 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 BPIFB3P59826 476 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 LIAT1Q6ZQX7 453 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 TMUB2Q71RG4 321 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 TCF23Q7RTU1 214 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 SGPP2Q8IWX5 399 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 SFT2D1Q8WV19 159 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 SDSLQ96GA7 329 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 SEC22AQ96IW7 307 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 LURAP1Q96LR2 239 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 TMEM222Q9H0R3 208 aa7.43□□□□□ -1.22
TDP1-210ENST00000554976 CLEC18AA5D8T8 446 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 C17orf100A8MU93 164 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 TK1P04183 234 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 FBP1P09467 338 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 GMFBP60983 142 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 AESQ08117 197 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 OPCMLQ14982 345 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 HSD17B13Q7Z5P4 300 aaPredicted RBP7.42□□□□□ -1.22
TDP1-210ENST00000554976 TBC1D26Q86UD7 250 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 CLEC18CQ8NCF0 446 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 PCNPQ8WW12 178 aaKnown RBP7.42□□□□□ -1.22
TDP1-210ENST00000554976 NEUROG1Q92886 237 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 C2orf50Q96LR7 162 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 GAFA1Q96PS6 74 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 DIRC2Q96SL1 478 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 CCL28Q9NRJ3 127 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 OR14J1Q9UGF5 321 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 C3orf85A0A1B0GTC6 90 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 OOEPA6NGQ2 149 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 GPR31O00270 319 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 EIF3GO75821 320 aaKnown RBP eCLIP7.42□□□□□ -1.22
TDP1-210ENST00000554976 PLA2G5P39877 138 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 TNFAIP6P98066 277 aaPredicted RBP7.42□□□□□ -1.22
TDP1-210ENST00000554976 MSMO1Q15800 293 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 PHLDA2Q53GA4 152 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 FAM53AQ6NSI3 398 aaPredicted RBP7.42□□□□□ -1.22
TDP1-210ENST00000554976 ADAM5Q6NVV9 412 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 C11orf88Q6PI97 169 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 GSG1LQ6UXU4 331 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 KCNRGQ8N5I3 272 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 OR13A1Q8NGR1 328 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 NEK7Q8TDX7 302 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 RRNAD1Q96FB5 475 aaKnown RBP7.42□□□□□ -1.22
TDP1-210ENST00000554976 TAF9BQ9HBM6 251 aa7.42□□□□□ -1.22
TDP1-210ENST00000554976 IGHV3OR15-7A0A075B7D8 119 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 A6NLC8 198 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 ZNF729A6NN14 1252 aaPredicted RBP7.41□□□□□ -1.22
TDP1-210ENST00000554976 DEFB108AA8MXU0 73 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 K7N7A8 449 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 PGLYRP1O75594 196 aaPredicted RBP7.41□□□□□ -1.22
TDP1-210ENST00000554976 UCP1P25874 307 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 GLIPR1P48060 266 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 GGNBP1Q5YKI7 109 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 OR4D5Q8NGN0 318 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 OR1L1Q8NH94 360 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 OR10J5Q8NHC4 309 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 EDARADDQ8WWZ3 215 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 SNX22Q96L94 193 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 A0A1B0GW55 424 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 ARPC5O15511 151 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 S100A9P06702 114 aaKnown RBP7.41□□□□□ -1.22
TDP1-210ENST00000554976 DUX4L2P0CJ85 424 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 DUX4L3P0CJ86 424 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 DUX4L4P0CJ87 422 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 DUX4L5P0CJ88 424 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 DUX4L6P0CJ89 424 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 DUX4L7P0CJ90 424 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 PSMB6P28072 239 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 S100A11P31949 105 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 CD80P33681 288 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 HERV-K104P61576 105 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 SP6Q3SY56 376 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 DUX4L9Q6RFH8 374 aaPredicted RBP7.41□□□□□ -1.22
TDP1-210ENST00000554976 ATRAIDQ6UW56 229 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 SELENOHQ8IZQ5 122 aaKnown RBP7.41□□□□□ -1.22
TDP1-210ENST00000554976 PLPPR2Q96GM1 343 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 LINC00574Q9H8X3 128 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 OR5AC2Q9NZP5 309 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 RNF7Q9UBF6 113 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 DUX4Q9UBX2 424 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 TRAPPC2LQ9UL33 140 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 SVILO95425 2214 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 ACACAQ13085 2346 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.41□□□□□ -1.22
TDP1-210ENST00000554976 FAM74A7A6NL05 159 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 H0Y980 276 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 CDS2O95674 445 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 CYB5R3P00387 301 aaPredicted RBP7.41□□□□□ -1.22
TDP1-210ENST00000554976 CASP6P55212 293 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 FAM74A3Q4VXF1 159 aa7.41□□□□□ -1.22
TDP1-210ENST00000554976 KRBOX4Q5JUW0 171 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms