RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ZNF629Q9UEG4 869 aaPredicted RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 FBXL2Q9UKC9 423 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 MYO7BQ6PIF6 2116 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 NBASA2RRP1 2371 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 RELNP78509 3460 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 LOC100130705A0A1B0GUX0 176 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 A0A1W2PPI3 338 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 FAAHO00519 579 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 FOXH1O75593 365 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 EPPINO95925 133 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 CRYAAP02489 173 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 TSPAN19P0C672 248 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 OR13C7P0DN81 318 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 HSD17B1P14061 328 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 SRD5A1P18405 259 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 C4BPBP20851 252 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 IL12AP29459 219 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 OR1E2P47887 323 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 SULT1A1P50225 295 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 SULT1A2P50226 295 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 CAV3P56539 151 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 PIGPP57054 158 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 RAB38P57729 211 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 LOXL3P58215 753 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 RPS4XP62701 263 aaKnown RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 RHOBP62745 196 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 CDK6Q00534 326 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 DUSP2Q05923 314 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 FABP9Q0Z7S8 132 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF155Q12901 538 aaPredicted RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 MAD2L1Q13257 205 aaPredicted RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 HLA-DRB5Q30154 266 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF385BQ569K4 471 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 SYT14P1Q58G82 188 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 PYY3Q5JQD4 70 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 PRR31Q5SQ13 230 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 SPINK14Q6IE38 97 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 ADAMTSL5Q6ZMM2 481 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 ZNF782Q6ZMW2 699 aaPredicted RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 GOLGA7Q7Z5G4 137 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 OSR2Q8N2R0 312 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 SCCPDHQ8NBX0 429 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 OR4M1Q8NGD0 313 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 OR10G4Q8NGN3 311 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 OR13C6PQ8NH95 151 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 MAL2Q969L2 176 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 TMEM125Q96AQ2 219 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 BTF3L4Q96K17 158 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 RBP7Q96R05 134 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 GINS3Q9BRX5 216 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 EBPLQ9BY08 206 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 C5orf66Q9H5L9 145 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 C7orf69Q9H7B7 122 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 CACYBPQ9HB71 228 aaKnown RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 MSL2Q9HCI7 577 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 METTL1Q9UBP6 276 aaKnown RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 SCP2D1Q9UJQ7 156 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 DIDO1Q9BTC0 2240 aaKnown RBP2.28□□□□□ -2.04
PRPF39-206ENST00000554429 NF1P21359 2839 aa2.28□□□□□ -2.04
PRPF39-206ENST00000554429 A0A0A6YYD5 115 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 A0A0G2JNJ9 132 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 A0A1B0GTH9 108 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 SERINC4A6NH21 518 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 OR4C46A6NHA9 309 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 ZAR1LA6NP61 321 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 KRBOX1C9JBD0 128 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 FXYD1O00168 92 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 CORTO00230 105 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 MFNGO00587 321 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 SH2D1BO14796 132 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 ERI3O43414 337 aaKnown RBP2.28□□□□□ -2.05
PRPF39-206ENST00000554429 OR7C2O60412 319 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 ICOSLGO75144 302 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 ZFAND5O76080 213 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 HOXB9P17482 250 aaPredicted RBP2.28□□□□□ -2.05
PRPF39-206ENST00000554429 GPX3P22352 226 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 LEPP41159 167 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 GZMKP49863 264 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 SSR4P51571 173 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 BIDP55957 195 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 TCTAP57738 103 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 RPL38P63173 70 aaKnown RBP2.28□□□□□ -2.05
PRPF39-206ENST00000554429 PRR5P85299 388 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 PLCXD2Q0VAA5 305 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 MYBPHQ13203 477 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 ELAVL1Q15717 326 aaKnown RBP2.28□□□□□ -2.05
PRPF39-206ENST00000554429 MSMPQ1L6U9 139 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF791Q3KP31 576 aaPredicted RBP2.28□□□□□ -2.05
PRPF39-206ENST00000554429 C19orf54Q5BKX5 351 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 DNLZQ5SXM8 178 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 C1orf195Q5TG92 126 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 DMKNQ6E0U4 476 aaPredicted RBP2.28□□□□□ -2.05
PRPF39-206ENST00000554429 XAF1Q6GPH4 301 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 WDR82Q6UXN9 313 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 TMEM64Q6YI46 380 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 CDC20BQ86Y33 519 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 MMD2Q8IY49 270 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 CA13Q8N1Q1 262 aa2.28□□□□□ -2.05
PRPF39-206ENST00000554429 LRRC25Q8N386 305 aaPredicted RBP2.28□□□□□ -2.05
PRPF39-206ENST00000554429 ZNF441Q8N8Z8 693 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms