RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 TMEM249Q2WGJ8 235 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 IGSF11Q5DX21 431 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 H1FOOQ8IZA3 346 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-210ENST00000553950 POC5Q8NA72 575 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 WFDC11Q8NEX6 87 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 GIMAP1Q8WWP7 306 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 TNFRSF14Q92956 283 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 DACT3Q96B18 629 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-210ENST00000553950 SCGB3A2Q96PL1 93 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 YPEL2Q96QA6 119 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 SLC25A21Q9BQT8 299 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-210ENST00000553950 UNKLQ9H9P5 680 aaKnown RBP11.93□□□□□ -0.5
SHMT2-210ENST00000553950 GFOD1Q9NXC2 390 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 WNK2Q9Y3S1 2297 aa11.93□□□□□ -0.5
SHMT2-210ENST00000553950 CCDC168Q8NDH2 2452 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 A0A087X0M5 115 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 A0A1B0GX30 115 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 FAM172BPA6NC97 362 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 SLC22A5O76082 557 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 CD34P28906 385 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 PAX2Q02962 417 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 SURF2Q15527 256 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-210ENST00000553950 PRAMEF5Q5TYX0 476 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 DCAF12L2Q5VW00 463 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 LPCAT3Q6P1A2 487 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 TEX29Q8N6K0 151 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 C8orf31Q8N9H6 132 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 MINDY2Q8NBR6 621 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 OR2AK2Q8NG84 335 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 OR13D1Q8NGV5 346 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 TMEM186Q96B77 213 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 TINAGL1Q9GZM7 467 aaPredicted RBP11.92□□□□□ -0.5
SHMT2-210ENST00000553950 DPAGT1Q9H3H5 408 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 GHITMQ9H3K2 345 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 TBC1D24Q9ULP9 559 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 INSIG2Q9Y5U4 225 aa11.92□□□□□ -0.5
SHMT2-210ENST00000553950 IGKV1-6A0A0C4DH72 117 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 LINC00854A0A1B0GVQ3 168 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 FAM240BA0A1B0GVZ2 78 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 TUSC2O75896 110 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 PPYP01298 95 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 PRTN3P24158 256 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 NFYBP25208 207 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 S100GP29377 79 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 FCGR2CP31995 323 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 MSMO1Q15800 293 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 SCGB2B2Q4G0G5 96 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 DHRS11Q6UWP2 260 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 IDO2Q6ZQW0 420 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 OR51S1Q8NGJ8 323 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 OR56B4Q8NH76 319 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 RFESDQ8TAC1 157 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 MOB3AQ96BX8 217 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 ZNF2Q9BSG1 426 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-210ENST00000553950 ABHD14AQ9BUJ0 271 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 C11orf54Q9H0W9 315 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-210ENST00000553950 TMEM133Q9H2Q1 129 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 HEXA-AS1Q9H8Q6 139 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 LPAR2Q9HBW0 351 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 RDH8Q9NYR8 311 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 OR2W1Q9Y3N9 320 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 AMMECR1Q9Y4X0 333 aaPredicted RBP11.91□□□□□ -0.5
SHMT2-210ENST00000553950 RBM7Q9Y580 266 aaKnown RBP11.91□□□□□ -0.5
SHMT2-210ENST00000553950 CSMD2Q7Z408 3487 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 ITPR2Q14571 2701 aa11.91□□□□□ -0.5
SHMT2-210ENST00000553950 FLNBO75369 2602 aaKnown RBP11.9□□□□□ -0.5
SHMT2-210ENST00000553950 MEX3AA1L020 520 aaKnown RBP11.9□□□□□ -0.5
SHMT2-210ENST00000553950 PLA2G10O15496 165 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 TOX4O94842 621 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 IGHV4-31P0DP07 118 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 OMGP23515 440 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 IL3RAP26951 378 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 SLC6A1P30531 599 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 CEACAM6P40199 344 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 LUMP51884 338 aaPredicted RBP11.9□□□□□ -0.5
SHMT2-210ENST00000553950 UCP3P55916 312 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 LOXL3P58215 753 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 IFITM3Q01628 133 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 LTC4SQ16873 150 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 PLA1AQ53H76 456 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 CYB5R2Q6BCY4 276 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 FAAP20Q6NZ36 180 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 LHFPL1Q86WI0 220 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 OR4D10Q8NGI6 311 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 OR9G1Q8NH87 305 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 TERB2Q8NHR7 220 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 ZNF596Q8TC21 504 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 CREB3L1Q96BA8 519 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 SLC6A7Q99884 636 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 CLEC7AQ9BXN2 247 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 OR1A1Q9P1Q5 309 aa11.9□□□□□ -0.5
SHMT2-210ENST00000553950 ASH1LQ9NR48 2969 aaKnown RBP11.9□□□□□ -0.5
SHMT2-210ENST00000553950 ARHGAP32A7KAX9 2087 aa11.9□□□□□ -0.51
SHMT2-210ENST00000553950 ZNF735P0CB33 412 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 AADACP22760 399 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 NFYAP23511 347 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-210ENST00000553950 PPP1CCP36873 323 aaKnown RBP11.89□□□□□ -0.51
SHMT2-210ENST00000553950 PRRX1P54821 245 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 ARF6P62330 175 aa11.89□□□□□ -0.51
SHMT2-210ENST00000553950 MORN2Q502X0 79 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms