RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 OR2S2Q9NQN1 319 aa9.7□□□□□ -0.86
NEK9-202ENST00000553823 ZNF69Q9UC07 566 aa9.7□□□□□ -0.86
NEK9-202ENST00000553823 RPUSD1Q9UJJ7 312 aaKnown RBP9.7□□□□□ -0.86
NEK9-202ENST00000553823 FLVCR2Q9UPI3 526 aa9.7□□□□□ -0.86
NEK9-202ENST00000553823 CCDC168Q8NDH2 2452 aa9.7□□□□□ -0.86
NEK9-202ENST00000553823 IGHV4-30-2A0A087WSY4 118 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 A0A1W2PPH5 198 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 FAM172BPA6NC97 362 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 PHF1O43189 567 aaPredicted RBP9.69□□□□□ -0.86
NEK9-202ENST00000553823 RLN1P04808 185 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 PGAM2P15259 253 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 FPR2P25090 351 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 RAG2P55895 527 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 FXYD4P59646 89 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 LMO4P61968 165 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 SURF2Q15527 256 aaPredicted RBP9.69□□□□□ -0.86
NEK9-202ENST00000553823 LTC4SQ16873 150 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 CLEC12BQ2HXU8 276 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 CD276Q5ZPR3 534 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 OR10A7Q8NGE5 316 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 MARCH1Q8TCQ1 289 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 ABCA2Q9BZC7 2435 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 TOLLIPQ9H0E2 274 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 RDH8Q9NYR8 311 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 IDI2-AS1Q9NZ38 188 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 GNG12Q9UBI6 72 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 JPT1Q9UK76 154 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 VSIG4Q9Y279 399 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 OR2W1Q9Y3N9 320 aa9.69□□□□□ -0.86
NEK9-202ENST00000553823 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.68□□□□□ -0.862e-6■■□□□ 13.9
NEK9-202ENST00000553823 PRRC2AP48634 2157 aaKnown RBP9.68□□□□□ -0.86
NEK9-202ENST00000553823 ITPR2Q14571 2701 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 LOC105371242A0A075B767 164 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 IGHV3-43A0A0B4J1X8 118 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 PPIAL4CA0A0B4J2A2 164 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 C22orf46C9J442 243 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 PEX14O75381 377 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 DHFRP00374 187 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 PPIAL4GP0DN37 164 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 IGHV3-43DP0DP04 118 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 SLC25A16P16260 332 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 CCL3L1P16619 93 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 OMGP23515 440 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 UCP3P55916 312 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 DLX6P56179 175 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 RAB25P57735 213 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 LOXL3P58215 753 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 GNMTQ14749 295 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 LY6G5BQ8NDX9 201 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 OR10V1Q8NGI7 309 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 OR52M1Q8NGK5 317 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 TOMM40LQ969M1 308 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 FXYD6Q9H0Q3 95 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 GFOD1Q9NXC2 390 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 GPR132Q9UNW8 380 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 CREBBPQ92793 2442 aa9.68□□□□□ -0.86
NEK9-202ENST00000553823 IGHV4-61A0A0C4DH41 118 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 A0A1B0GVG6 124 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 KIAA1324LA8MWY0 1029 aaPredicted RBP9.67□□□□□ -0.86
NEK9-202ENST00000553823 A8MXK9 166 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 YPEL1O60688 119 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 RGS11O94810 467 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 LIPFP07098 398 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 CTSDP07339 412 aaPredicted RBP9.67□□□□□ -0.86
NEK9-202ENST00000553823 ANXA7P20073 488 aaKnown RBP9.67□□□□□ -0.86
NEK9-202ENST00000553823 NFYBP25208 207 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 PPP1CCP36873 323 aaKnown RBP9.67□□□□□ -0.86
NEK9-202ENST00000553823 MECP2P51608 486 aaKnown RBP9.67□□□□□ -0.86
NEK9-202ENST00000553823 LUMP51884 338 aaPredicted RBP9.67□□□□□ -0.86
NEK9-202ENST00000553823 BAMBIQ13145 260 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 MORN2Q502X0 79 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 PRAMEF5Q5TYX0 476 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 FAM53AQ6NSI3 398 aaPredicted RBP9.67□□□□□ -0.86
NEK9-202ENST00000553823 LPCAT3Q6P1A2 487 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 HEPN1Q6WQI6 88 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 TMED4Q7Z7H5 227 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 SLC38A6Q8IZM9 456 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 ZFAND1Q8TCF1 268 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 SECTM1Q8WVN6 248 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 YPEL2Q96QA6 119 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 SLC5A7Q9GZV3 580 aa9.67□□□□□ -0.86
NEK9-202ENST00000553823 ALX4Q9H161 411 aaPredicted RBP9.67□□□□□ -0.86
NEK9-202ENST00000553823 C14orf166Q9Y224 244 aaKnown RBP9.67□□□□□ -0.86
NEK9-202ENST00000553823 MAP1AP78559 2803 aaPredicted RBP9.67□□□□□ -0.86
NEK9-202ENST00000553823 IGKV1D-13A0A0B4J2D9 117 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 C17orf98A8MV24 154 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 ENSAO43768 121 aaKnown RBP9.66□□□□□ -0.86
NEK9-202ENST00000553823 PRAF2O60831 178 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 FOXH1O75593 365 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 MMP23AO75900 390 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 IGKV1-13P0DP09 117 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 PI3P19957 117 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 ZFP36P26651 326 aaKnown RBP9.66□□□□□ -0.86
NEK9-202ENST00000553823 TAS2R31P59538 309 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 TATDN3Q17R31 274 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 Q5PR19 223 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 LY6G6FQ5SQ64 297 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 FAM216AQ8WUB2 273 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 EDARADDQ8WWZ3 215 aa9.66□□□□□ -0.86
NEK9-202ENST00000553823 DMRTB1Q96MA1 342 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms