RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SLC25A48Q6ZT89 311 aaKnown RBP14.4□□□□□ -0.1
SHMT2-206ENST00000553529 THNSL2Q86YJ6 484 aa14.4□□□□□ -0.1
SHMT2-206ENST00000553529 CDH26Q8IXH8 852 aa14.4□□□□□ -0.1
SHMT2-206ENST00000553529 ODF3L1Q8IXM7 274 aa14.4□□□□□ -0.1
SHMT2-206ENST00000553529 LINC00311Q8N616 119 aa14.4□□□□□ -0.1
SHMT2-206ENST00000553529 MRPS24Q96EL2 167 aaKnown RBP14.4□□□□□ -0.1
SHMT2-206ENST00000553529 AKR1E2Q96JD6 320 aa14.4□□□□□ -0.1
SHMT2-206ENST00000553529 HSPB9Q9BQS6 159 aa14.4□□□□□ -0.1
SHMT2-206ENST00000553529 TMEM14DPA8MWL7 114 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 SLC22A1O15245 554 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 GAPDHP04406 335 aaKnown RBP14.39□□□□□ -0.11
SHMT2-206ENST00000553529 CNTFRP26992 372 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 OR3A3P47888 321 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 F2RL1P55085 397 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 OR8H3Q8N146 312 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 MS4A15Q8N5U1 240 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 Q8N9W7 124 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 OR52M1Q8NGK5 317 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 DUX3Q96PT4 197 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 LPAR5Q9H1C0 372 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 SPACA1Q9HBV2 294 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 PLSCR3Q9NRY6 295 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 MBNL3Q9NUK0 354 aaKnown RBP14.39□□□□□ -0.11
SHMT2-206ENST00000553529 TPRKBQ9Y3C4 175 aa14.39□□□□□ -0.11
SHMT2-206ENST00000553529 OR10A3P58181 314 aa14.38□□□□□ -0.11
SHMT2-206ENST00000553529 TPBGQ13641 420 aa14.38□□□□□ -0.11
SHMT2-206ENST00000553529 EBI3Q14213 229 aa14.38□□□□□ -0.11
SHMT2-206ENST00000553529 MORN2Q502X0 79 aa14.38□□□□□ -0.11
SHMT2-206ENST00000553529 GLT8D1Q68CQ7 371 aa14.38□□□□□ -0.11
SHMT2-206ENST00000553529 ETV3LQ6ZN32 361 aa14.38□□□□□ -0.11
SHMT2-206ENST00000553529 SLC16A12Q6ZSM3 486 aa14.38□□□□□ -0.11
SHMT2-206ENST00000553529 TMEM59Q9BXS4 323 aa14.38□□□□□ -0.11
SHMT2-206ENST00000553529 MRPL20Q9BYC9 149 aaKnown RBP14.38□□□□□ -0.11
SHMT2-206ENST00000553529 OR2S2Q9NQN1 319 aa14.38□□□□□ -0.11
SHMT2-206ENST00000553529 PCDHB16Q9NRJ7 776 aa14.38□□□□□ -0.11
SHMT2-206ENST00000553529 A0A0B4J203 849 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 SMIM30A4D0T7 59 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 PSMB11A5LHX3 300 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 FAM90A10PA6NDY2 464 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 FAM90A7PA6NKC0 464 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 NCBP2LA6PVI3 153 aaKnown RBP14.37□□□□□ -0.11
SHMT2-206ENST00000553529 FAM90A23PA8MXZ1 464 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 SPINT2O43291 252 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 CD37P11049 281 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 CPEP16870 476 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 C6orf183Q5T699 404 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 KPRPQ5T749 579 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-206ENST00000553529 IZUMO1Q8IYV9 350 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 SETD6Q8TBK2 473 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 PHYHIPQ92561 330 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 PHF21AQ96BD5 680 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 CST11Q9H112 138 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 AK3Q9UIJ7 227 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 DNAH3Q8TD57 4116 aa14.37□□□□□ -0.11
SHMT2-206ENST00000553529 SERPINE3A8MV23 424 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 ST8SIA5O15466 376 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 PF4V1P10720 104 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 CALRP27797 417 aaKnown RBP14.36□□□□□ -0.11
SHMT2-206ENST00000553529 BLVRBP30043 206 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-206ENST00000553529 EMX1Q04741 257 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-206ENST00000553529 MLLT11Q13015 90 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-206ENST00000553529 HMGN3Q15651 99 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 HES5Q5TA89 166 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 PRSS48Q7RTY5 328 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 TGIF2LXQ8IUE1 241 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 SVOPQ8N4V2 548 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 OR4F17Q8NGA8 305 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 OR51D1Q8NGF3 324 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 OR4F4Q96R69 305 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 MGLLQ99685 303 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 TM2D1Q9BX74 207 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 OR1A1Q9P1Q5 309 aa14.36□□□□□ -0.11
SHMT2-206ENST00000553529 TSSC4Q9Y5U2 329 aaPredicted RBP14.36□□□□□ -0.11
SHMT2-206ENST00000553529 NOTCH3Q9UM47 2321 aa14.35□□□□□ -0.11
SHMT2-206ENST00000553529 FOXI3A8MTJ6 420 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-206ENST00000553529 SLC2A2P11168 524 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-206ENST00000553529 GPR12P47775 334 aa14.35□□□□□ -0.11
SHMT2-206ENST00000553529 C8orf86Q6ZUL3 223 aa14.35□□□□□ -0.11
SHMT2-206ENST00000553529 SLC35E3Q7Z769 313 aa14.35□□□□□ -0.11
SHMT2-206ENST00000553529 C8orf31Q8N9H6 132 aa14.35□□□□□ -0.11
SHMT2-206ENST00000553529 OR4X2Q8NGF9 303 aa14.35□□□□□ -0.11
SHMT2-206ENST00000553529 OR6M1Q8NGM8 313 aa14.35□□□□□ -0.11
SHMT2-206ENST00000553529 IL1F10Q8WWZ1 152 aa14.35□□□□□ -0.11
SHMT2-206ENST00000553529 NEDD4LQ96PU5 975 aa14.35□□□□□ -0.11
SHMT2-206ENST00000553529 ABHD14AQ9BUJ0 271 aa14.35□□□□□ -0.11
SHMT2-206ENST00000553529 PLGRKTQ9HBL7 147 aa14.35□□□□□ -0.11
SHMT2-206ENST00000553529 M0QZK8 103 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 ATP6V1G2O95670 118 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 NAPSAO96009 420 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 IGHG2P01859 326 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 ZNF137PP52743 207 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 TMEM50BP56557 158 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 LINC00205P59089 165 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 LSAMPQ13449 338 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 MOGAT2Q3SYC2 334 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 RPL39P5Q59GN2 51 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 PLAC9Q5JTB6 97 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 FOXB2Q5VYV0 432 aa14.34□□□□□ -0.11
SHMT2-206ENST00000553529 GLDNQ6ZMI3 551 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-206ENST00000553529 NR2C2APQ86WQ0 139 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms