RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 ECDO95905 644 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-220ENST00000553491 HAND1O96004 215 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 IGLV3-1P01715 115 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 MT-ND2P03891 347 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 LIPFP07098 398 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 SFTPBP07988 381 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 PGA5P0DJD9 388 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 ZNF44P15621 663 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 SERPINA2P20848 420 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 CCL1P22362 96 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 ZNF93P35789 620 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-220ENST00000553491 DLX1P56177 255 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 TAS2R43P59537 309 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 PAX8Q06710 450 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 PNRC1Q12796 327 aaPredicted RBP3.82□□□□□ -1.8
ATXN3-220ENST00000553491 IL24Q13007 206 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 BAMBIQ13145 260 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 CDK5R1Q15078 307 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 SPHARQ15513 63 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 KISS1Q15726 138 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 GRK1Q15835 563 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 DGUOKQ16854 277 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 Q499Y3 187 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 ACSM3Q53FZ2 586 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 FAM76BQ5HYJ3 339 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 RBM48Q5RL73 367 aaKnown RBP3.82□□□□□ -1.8
ATXN3-220ENST00000553491 ATAD3CQ5T2N8 411 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 DDI2Q5TDH0 399 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 LIPKQ5VXJ0 399 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 TEX36Q5VZQ5 186 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 TMEM42Q69YG0 159 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 LAIR2Q6ISS4 152 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 ZNF841Q6ZN19 808 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 UTS2BQ765I0 119 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 C16orf82Q7Z2V1 217 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 VMO1Q7Z5L0 202 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 ZNF561Q8N587 486 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 SIGLECL1Q8N7X8 197 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 OR5D13Q8NGL4 314 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 OR52N1Q8NH53 320 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 ANGPTL6Q8NI99 470 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 NEK7Q8TDX7 302 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 UFD1Q92890 307 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 C10orf35Q96D05 121 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 GAFA1Q96PS6 74 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 OR5M11Q96RB7 305 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 SLC6A7Q99884 636 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 ZNF649Q9BS31 505 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 PKIBQ9C010 78 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 CHST6Q9GZX3 395 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 SLITRK2Q9H156 845 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 METTL9Q9H1A3 318 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 TLNRD1Q9H1K6 362 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 DPAGT1Q9H3H5 408 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 EXOSC4Q9NPD3 245 aaKnown RBP3.82□□□□□ -1.8
ATXN3-220ENST00000553491 SIRT7Q9NRC8 400 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 RBFOX1Q9NWB1 397 aaKnown RBP3.82□□□□□ -1.8
ATXN3-220ENST00000553491 RPUSD1Q9UJJ7 312 aaKnown RBP3.82□□□□□ -1.8
ATXN3-220ENST00000553491 NUP50Q9UKX7 468 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 BLOC1S6Q9UL45 172 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 JMJD1CQ15652 2540 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 AKAP9Q99996 3911 aa3.82□□□□□ -1.8
ATXN3-220ENST00000553491 NSD1Q96L73 2696 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 ZNF469Q96JG9 3925 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 TRAV40A0A0B4J280 105 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 A0A1W2PRV1 198 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 TRIM77I1YAP6 450 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 SIGLEC5O15389 551 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 CRTAPO75718 401 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 PAHP00439 452 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 CRYBA1P05813 215 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 IGHV4-38-2P0DP08 117 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 COX7A1P24310 79 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 CRHBPP24387 322 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 CFHR2P36980 270 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 PTGFRP43088 359 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 OR3A4PP47883 348 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 RPL31P62899 125 aaKnown RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 AESQ08117 197 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 PLA2G7Q13093 441 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 KLRD1Q13241 179 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 DYNC1I2Q13409 638 aaKnown RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 INSL4Q14641 139 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 LTC4SQ16873 150 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 SLC22A6Q4U2R8 563 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 ZNF585BQ52M93 769 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 YIF1BQ5BJH7 314 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 STUMQ69YW2 141 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 DMKNQ6E0U4 476 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 CENPVQ7Z7K6 275 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-220ENST00000553491 Q8IYB0 196 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 PNKDQ8N490 385 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 TPRX1Q8N7U7 411 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 OR4S1Q8NGB4 309 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 OR51A2Q8NGJ7 313 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 CCDC107Q8WV48 283 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 NUDCD2Q8WVJ2 157 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 TMEM158Q8WZ71 300 aa3.81□□□□□ -1.8
ATXN3-220ENST00000553491 RGP1Q92546 391 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms