RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 MBOAT2Q6ZWT7 520 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 FAM57BQ71RH2 274 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 DCXRQ7Z4W1 244 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 VTCN1Q7Z7D3 282 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 CYP4Z1Q86W10 505 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 ENTHD1Q8IYW4 607 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 DEFB125Q8N687 156 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF565Q8N9K5 539 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 Q8N9W7 124 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 OR13C2Q8NGS9 318 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 FAM81AQ8TBF8 368 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 SLAMF6Q96DU3 332 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 C5orf30Q96GV9 206 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 RDH12Q96NR8 316 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 ERMAPQ96PL5 475 aaPredicted RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 GPX7Q96SL4 187 aaPredicted RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 S1PR3Q99500 378 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 GGTLC1Q9BX51 225 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 FN3KQ9H479 309 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 SRD5A3Q9H8P0 318 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 CHMP1AQ9HD42 196 aaPredicted RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 SMPD3Q9NY59 655 aaPredicted RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 SLC7A11Q9UPY5 501 aa3.89□□□□□ -1.79
CKAP4-203ENST00000553039 SAMHD1Q9Y3Z3 626 aaKnown RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 FAM32AQ9Y421 112 aaKnown RBP3.89□□□□□ -1.79
CKAP4-203ENST00000553039 HECTD4Q9Y4D8 3996 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 TRAV41A0A0B4J266 112 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 A0A1W2PPQ1 181 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 SMIM30A4D0T7 59 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 LINC00473A8K010 186 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF878C9JN71 531 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 J3QR06 171 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 J3QT63 122 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF593O00488 134 aaPredicted RBP3.88□□□□□ -1.79
CKAP4-203ENST00000553039 VCYO14598 125 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 MGST3O14880 152 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 RTL8CO15255 209 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 DENRO43583 198 aaKnown RBP3.88□□□□□ -1.79
CKAP4-203ENST00000553039 SELENOFO60613 162 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF737O75373 536 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 MMP23AO75900 390 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 MOSP00540 346 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 ALPLP05186 524 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 RPSAP08865 295 aaKnown RBP3.88□□□□□ -1.79
CKAP4-203ENST00000553039 GABRR1P24046 479 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 CD1BP29016 333 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 RRM2P31350 389 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 FMO3P31513 532 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 HAAOP46952 286 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 BLVRAP53004 296 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 SMIM11AP58511 58 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 RIPPLY1Q0D2K3 151 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 LGALS9BQ3B8N2 356 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 MOGAT2Q3SYC2 334 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 PYHIN1Q6K0P9 492 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 FAM53AQ6NSI3 398 aaPredicted RBP3.88□□□□□ -1.79
CKAP4-203ENST00000553039 SLC16A13Q7RTY0 426 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 NR2C2APQ86WQ0 139 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 ANGPTL5Q86XS5 388 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 RDH10Q8IZV5 341 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 CENPSQ8N2Z9 138 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 PARP16Q8N5Y8 322 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 UXS1Q8NBZ7 420 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF555Q8NEP9 628 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 OR9G4Q8NGQ1 327 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 OR2T4Q8NH00 348 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 C11orf45Q8TAV5 145 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 NRBF2Q96F24 287 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 C7orf34Q96L11 122 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 CNBD2Q96M20 576 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 NMNAT3Q96T66 252 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 FEVQ99581 238 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 SLC29A1Q99808 456 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 TM2D2Q9BX73 214 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 ANKRD60Q9BZ19 345 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 GABARAPL1Q9H0R8 117 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 ALX4Q9H161 411 aaPredicted RBP3.88□□□□□ -1.79
CKAP4-203ENST00000553039 RPRD1BQ9NQG5 326 aaKnown RBP3.88□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF107Q9UII5 783 aaPredicted RBP3.88□□□□□ -1.79
CKAP4-203ENST00000553039 RNF150Q9ULK6 438 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 FBXO7Q9Y3I1 522 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 ENPP4Q9Y6X5 453 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 U3KQV3 271 aa3.88□□□□□ -1.79
CKAP4-203ENST00000553039 TRBV2A0A0J9YWF9 115 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 IGLL5B9A064 214 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 C11orf94C9JXX5 98 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 TNFRSF11BO00300 401 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 ARPC3O15145 178 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 ST8SIA3O43173 380 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 AIREO43918 545 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 DIRAS1O95057 198 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 GADD45GO95257 159 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 NRASP01111 189 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 TNFRSF1BP20333 461 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 NFYBP25208 207 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 CAPGP40121 348 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 APOC4P55056 127 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 P2RX3P56373 397 aa3.87□□□□□ -1.79
CKAP4-203ENST00000553039 ZNF121P58317 390 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms