RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 ZNF701M0R085 212 aaPredicted RBP2.77□□□□□ -1.97
LIMA1-205ENST00000550592 CETN3O15182 167 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 SULT1B1O43704 296 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 IGLV3-25P01717 112 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 IL1RNP18510 177 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 CFHR2P36980 270 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 PSMD4P55036 377 aaKnown RBP2.77□□□□□ -1.97
LIMA1-205ENST00000550592 TAC4Q86UU9 113 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 MDP1Q86V88 176 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 OOSP2Q86WS3 158 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 LINC00469Q8N7U9 141 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 SPERTQ8NA61 448 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 OR9A2Q8NGT5 310 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 RXFP4Q8TDU9 374 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 ZNF418Q8TF45 676 aaPredicted RBP2.77□□□□□ -1.97
LIMA1-205ENST00000550592 RERGQ96A58 199 aaPredicted RBP2.77□□□□□ -1.97
LIMA1-205ENST00000550592 LINC00477Q96M19 166 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 ANGPTL4Q9BY76 406 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 PARVBQ9HBI1 364 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 RHBDL2Q9NX52 303 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 CHTOPQ9Y3Y2 248 aaKnown RBP2.77□□□□□ -1.97
LIMA1-205ENST00000550592 FAM215AQ9Y5M1 114 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 PRR14LQ5THK1 2151 aa2.77□□□□□ -1.97
LIMA1-205ENST00000550592 A0A0B4J2E0 115 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 HACD1B0YJ81 288 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 KLRC4O43908 158 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 PFDN1O60925 122 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 SERPINB7O75635 380 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 OR2B3O76000 313 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 RCBTB2O95199 551 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 HLA-DQB1P01920 261 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 MT-ND4P03905 459 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 KLK1P06870 262 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 CRYGCP07315 174 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 GABRA1P14867 456 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 ZNF3P17036 446 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 UBE2E1P51965 193 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 RHOAP61586 193 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 MRPS15P82914 257 aaKnown RBP2.76□□□□□ -1.97
LIMA1-205ENST00000550592 IFITM3Q01628 133 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 RPL18AQ02543 176 aaKnown RBP2.76□□□□□ -1.97
LIMA1-205ENST00000550592 GNA12Q03113 381 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 SNCBQ16143 134 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 YIF1BQ5BJH7 314 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 TEX30Q5JUR7 227 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 OR2T5Q6IEZ7 315 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 TMPRSS11AQ6ZMR5 421 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 SLC35D2Q76EJ3 337 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 OR2W3Q7Z3T1 314 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 FAM9CQ8IZT9 166 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 OSR2Q8N2R0 312 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 ZNF615Q8N8J6 731 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 GATSQ8NAP1 163 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 OR2T29Q8NH02 315 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 UBA3Q8TBC4 463 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 SNF8Q96H20 258 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 KCNS1Q96KK3 526 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 FAM19A4Q96LR4 140 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 UBE2E2Q96LR5 201 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 TSC22D3Q99576 134 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 DRC3Q9H069 523 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 STMN4Q9H169 189 aaPredicted RBP2.76□□□□□ -1.97
LIMA1-205ENST00000550592 PLCE1Q9P212 2302 aa2.76□□□□□ -1.97
LIMA1-205ENST00000550592 CPAMD8Q8IZJ3 1885 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 STAB2Q8WWQ8 2551 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 IGLV3-12A0A075B6K2 115 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 A0A0A6YYD5 115 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 LCE6AA0A183 80 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 LINC01619G3V211 115 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 PLIN3O60664 434 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 SMIM24O75264 130 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 RBBP9O75884 186 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 OTCP00480 354 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 PTHP01270 115 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 TRBV12-3P01733 135 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 COX6A1P12074 109 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 SLC25A16P16260 332 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 PITPNAQ00169 270 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 PIGHQ14442 188 aaPredicted RBP2.75□□□□□ -1.97
LIMA1-205ENST00000550592 OR1Q1Q15612 314 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 WHAMMP3Q1A5X7 153 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 SYPL2Q5VXT5 272 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 SPOPLQ6IQ16 392 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 C8orf74Q6P047 294 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 WDR59Q6PJI9 974 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 NEGR1Q7Z3B1 354 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 HMGN2P46Q86SG4 172 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 FBXO36Q8NEA4 188 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 GHSRQ92847 366 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 SLC35B4Q969S0 331 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 RDH12Q96NR8 316 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 OR4K3Q96R72 315 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 CGREF1Q99674 301 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 EMC6Q9BV81 110 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 ADA2Q9NZK5 511 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 CES1P1Q9UKY3 287 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 OR51B2Q9Y5P1 312 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 S4R3C0 116 aa2.75□□□□□ -1.97
LIMA1-205ENST00000550592 FREM3P0C091 2139 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms