RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 TSPOP30536 169 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 ELF3P78545 371 aaPredicted RBP3.5□□□□□ -1.85
HCFC2-204ENST00000550335 GTF2BQ00403 316 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 ZNF404Q494X3 552 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 NXNL2Q5VZ03 156 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 CLEC6AQ6EIG7 209 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 ALKAL1Q6UXT8 129 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 BHLHA15Q7RTS1 189 aaPredicted RBP3.5□□□□□ -1.85
HCFC2-204ENST00000550335 SPATA24Q86W54 205 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 TMEM105Q8N8V8 129 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 TMEM161BQ8NDZ6 487 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 UBA3Q8TBC4 463 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 PHF10Q8WUB8 498 aaKnown RBP3.5□□□□□ -1.85
HCFC2-204ENST00000550335 RTN4IP1Q8WWV3 396 aaPredicted RBP3.5□□□□□ -1.85
HCFC2-204ENST00000550335 WDR34Q96EX3 536 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 CCDC94Q9BW85 323 aaPredicted RBP3.5□□□□□ -1.85
HCFC2-204ENST00000550335 MS4A8Q9BY19 250 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 ZNF436Q9C0F3 470 aaPredicted RBP3.5□□□□□ -1.85
HCFC2-204ENST00000550335 DRC3Q9H069 523 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 LHX5Q9H2C1 402 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 PARVGQ9HBI0 331 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 RBM12B-AS1Q9P1G2 102 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 ATP6V1DQ9Y5K8 247 aa3.5□□□□□ -1.85
HCFC2-204ENST00000550335 MYO10Q9HD67 2058 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 LOC730098B7Z3J9 87 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 C9JQL5 133 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 ATP6V1G2O95670 118 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 RAB36O95755 333 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 SCGB1C2P0DMR2 95 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 ZNF32P17041 273 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 NELFEP18615 380 aaKnown RBP3.49□□□□□ -1.85
HCFC2-204ENST00000550335 IMPA1P29218 277 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 CBX5P45973 191 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 PSMD7P51665 324 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 SNRPFP62306 86 aaKnown RBP3.49□□□□□ -1.85
HCFC2-204ENST00000550335 ZNF816Q0VGE8 651 aaPredicted RBP3.49□□□□□ -1.85
HCFC2-204ENST00000550335 TMEM249Q2WGJ8 235 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 Q499Y3 187 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 ZNF720Q7Z2F6 126 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 PLCZ1Q86YW0 608 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 GATD1Q8NB37 220 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 OR5H2Q8NGV7 314 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 OR5AK3PQ8NH89 298 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 FAM45AQ8TCE6 357 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 SCGB1C1Q8TD33 95 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 CCL17Q92583 94 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 RORBQ92753 470 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 PPWD1Q96BP3 646 aaKnown RBP3.49□□□□□ -1.85
HCFC2-204ENST00000550335 DDIT4LQ96D03 193 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 FXYD5Q96DB9 178 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 LINC00477Q96M19 166 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 TMEM56Q96MV1 263 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 FAAP24Q9BTP7 215 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 ANGPTL4Q9BY76 406 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 HDHD2Q9H0R4 259 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 MFSD1Q9H3U5 465 aa3.49□□□□□ -1.85
HCFC2-204ENST00000550335 COL4A4P53420 1690 aaPredicted RBP3.49□□□□□ -1.85
HCFC2-204ENST00000550335 PRRC2BQ5JSZ5 2229 aaKnown RBP3.48□□□□□ -1.85
HCFC2-204ENST00000550335 SCN1AP35498 2009 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 NLRC5Q86WI3 1866 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 A0A1B0GTI1 187 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 PVALEFA0A1B0GWK0 134 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 A0A1B0GXF2 115 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 EFCAB9A8MZ26 197 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 PRAMEF26H0Y7S4 382 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 UPK1AO00322 258 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 SLC16A4O15374 487 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 NRASP01111 189 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 HRASP01112 189 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 KRASP01116 189 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 SOD3P08294 240 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 SNRPAP09012 282 aaKnown RBP3.48□□□□□ -1.85
HCFC2-204ENST00000550335 IL9P15248 144 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 S100A2P29034 98 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 NUDT2P50583 147 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 BAXQ07812 192 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 FUT5Q11128 374 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 TMEM241Q24JQ0 296 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 HSP90B2PQ58FF3 399 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 CLEC12AQ5QGZ9 265 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 MED27Q6P2C8 311 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 PRSS54Q6PEW0 395 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 DGAT2L6Q6ZPD8 337 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 FAM183BPQ6ZVS7 135 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 DYNC2LI1Q8TCX1 351 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 TNFRSF14Q92956 283 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 RBPMSQ93062 196 aaKnown RBP3.48□□□□□ -1.85
HCFC2-204ENST00000550335 YPEL4Q96NS1 127 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 BIRC8Q96P09 236 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 SPIN2AQ99865 258 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 SPIN2BQ9BPZ2 258 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 ZNF649Q9BS31 505 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 SUCNR1Q9BXA5 334 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 SLC19A3Q9BZV2 496 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 CYTL1Q9NRR1 136 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 TAC3Q9UHF0 121 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 OPN4Q9UHM6 478 aa3.48□□□□□ -1.85
HCFC2-204ENST00000550335 TICRRQ7Z2Z1 1910 aa3.47□□□□□ -1.85
HCFC2-204ENST00000550335 TRAV8-3A0A0A6YYJ7 113 aa3.47□□□□□ -1.85
HCFC2-204ENST00000550335 TRAV8-2A0A0B4J237 113 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms