RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 CMYA5Q8N3K9 4069 aa10.84□□□□□ -0.67
NUP188-211ENST00000550219 TRBV6-6A0A0A6YYG2 114 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 UBE2QL1A1L167 161 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 G3V4G9 280 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 HSPB6O14558 160 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 TALDO1P37837 337 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 KIR2DS4P43632 304 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 TAS2R20P59543 309 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 HABP2Q14520 560 aaPredicted RBP10.83□□□□□ -0.68
NUP188-211ENST00000550219 PNLIPRP3Q17RR3 467 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 HACD4Q5VWC8 232 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 RSBN1Q5VWQ0 802 aaPredicted RBP10.83□□□□□ -0.68
NUP188-211ENST00000550219 BAIAP2L2Q6UXY1 529 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 ZNF497Q6ZNH5 498 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 GDPD3Q7L5L3 318 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 TMEM219Q86XT9 240 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 IZUMO1Q8IYV9 350 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 C11orf42Q8N5U0 333 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 DTX3Q8N9I9 347 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 ETAA1Q9NY74 926 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 RABL2AQ9UBK7 228 aaPredicted RBP10.83□□□□□ -0.68
NUP188-211ENST00000550219 AK3Q9UIJ7 227 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 RABL2BQ9UNT1 228 aa10.83□□□□□ -0.68
NUP188-211ENST00000550219 NAPSAO96009 420 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 MT-ND4P03905 459 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 RAB13P51153 203 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 P2RX3P56373 397 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 AESQ08117 197 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 ATXN7L3Q14CW9 347 aaPredicted RBP10.82□□□□□ -0.68
NUP188-211ENST00000550219 AANATQ16613 207 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 NSUN5P1Q3KNT7 163 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 ARSJQ5FYB0 599 aaPredicted RBP10.82□□□□□ -0.68
NUP188-211ENST00000550219 KRBOX4Q5JUW0 171 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 ZNF880Q6PDB4 577 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 C11orf88Q6PI97 169 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 LIAT1Q6ZQX7 453 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 DYNAPQ8N1N2 210 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 OR13D1Q8NGV5 346 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 C15orf40Q8WUR7 153 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 ABHD1Q96SE0 405 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 RIMS4Q9H426 269 aaPredicted RBP10.82□□□□□ -0.68
NUP188-211ENST00000550219 ELF5Q9UKW6 265 aaPredicted RBP10.82□□□□□ -0.68
NUP188-211ENST00000550219 TCF19Q9Y242 345 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 V9GYH0 126 aa10.82□□□□□ -0.68
NUP188-211ENST00000550219 VWFP04275 2813 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 TMEM30CPA0ZSE6 113 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 FUOMA2VDF0 154 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 TMEM235A6NFC5 223 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 FABP12A6NFH5 140 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 C17orf98A8MV24 154 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 CTDSPLO15194 276 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 FBXO24O75426 580 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 PRB2P02812 416 aaPredicted RBP10.81□□□□□ -0.68
NUP188-211ENST00000550219 ZNF728P0DKX0 622 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 PTBP1P26599 531 aaKnown RBP eCLIP10.81□□□□□ -0.68
NUP188-211ENST00000550219 GLIPR1P48060 266 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 DLX6P56179 175 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 PITPNAQ00169 270 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 MEF2CQ06413 473 aaPredicted RBP10.81□□□□□ -0.68
NUP188-211ENST00000550219 SSX2Q16385 188 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 PYHIN1Q6K0P9 492 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 TPRX1Q8N7U7 411 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 MRPL30Q8TCC3 161 aaKnown RBP10.81□□□□□ -0.68
NUP188-211ENST00000550219 PIFOQ8TCI5 191 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 NEK7Q8TDX7 302 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 CORO2AQ92828 525 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 ZNF714Q96N38 554 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 CMSS1Q9BQ75 279 aaKnown RBP10.81□□□□□ -0.68
NUP188-211ENST00000550219 ZNF702PQ9H963 129 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 KIF25Q9UIL4 384 aa10.81□□□□□ -0.68
NUP188-211ENST00000550219 TBL2Q9Y4P3 447 aaKnown RBP10.81□□□□□ -0.68
NUP188-211ENST00000550219 WNK1Q9H4A3 2382 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 ODAMA1E959 279 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 ODF3BA8MYP8 253 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 F2RL2O00254 374 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 SULT1C2O00338 296 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 SSX5O60225 188 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 PEX14O75381 377 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 OPN1MWP04001 364 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 CD3GP09693 182 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 OPN1MW2P0DN77 364 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 OPN1MW3P0DN78 364 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 IGHV1-8P0DP01 117 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 DTYMKP23919 212 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 SRSF7Q16629 238 aaKnown RBP eCLIP10.8□□□□□ -0.68
NUP188-211ENST00000550219 SPANXN2Q5MJ10 180 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 ZNF626Q68DY1 528 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 Q6ZPA2 131 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 TCF23Q7RTU1 214 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 MFSD4AQ8N468 514 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 CFHR4Q92496 578 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 HDHD3Q9BSH5 251 aaPredicted RBP10.8□□□□□ -0.68
NUP188-211ENST00000550219 SCPEP1Q9HB40 452 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 AKIP1Q9NQ31 210 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 C12orf4Q9NQ89 552 aa10.8□□□□□ -0.68
NUP188-211ENST00000550219 MBNL3Q9NUK0 354 aaKnown RBP10.8□□□□□ -0.68
NUP188-211ENST00000550219 MRPS7Q9Y2R9 242 aaKnown RBP10.8□□□□□ -0.68
NUP188-211ENST00000550219 MEIKINA0A087WXM9 373 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 CGB3P0DN86 165 aa10.79□□□□□ -0.68
NUP188-211ENST00000550219 CGB7P0DN87 165 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms