RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 FAM216AQ8WUB2 273 aa17.54■□□□□ 0.4
BPTF-208ENST00000544778 ZG16BQ96DA0 208 aa17.54■□□□□ 0.4
BPTF-208ENST00000544778 SLC6A13Q9NSD5 602 aa17.54■□□□□ 0.4
BPTF-208ENST00000544778 AKIP1Q9NQ31 210 aa17.54■□□□□ 0.4
BPTF-208ENST00000544778 PLAUP00749 431 aa17.54■□□□□ 0.4
BPTF-208ENST00000544778 TMEFF2Q9UIK5 374 aaPredicted RBP17.54■□□□□ 0.4
BPTF-208ENST00000544778 CEACAM18A8MTB9 384 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 CTSDP07339 412 aaPredicted RBP17.53■□□□□ 0.4
BPTF-208ENST00000544778 CCL3P10147 92 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 CLEC18BQ6UXF7 455 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 OR52M1Q8NGK5 317 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 CCL13Q99616 98 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 HYPMO75409 117 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 AWAT1Q58HT5 328 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 TEX30Q5JUR7 227 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 LMX1BO60663 402 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 PPYP01298 95 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 UCN2Q96RP3 112 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 TMEM56-RWDD3S4R434 201 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 DNAJC13O75165 2243 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 SLC16A13Q7RTY0 426 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 TRIP12Q14669 1992 aaPredicted RBP17.53■□□□□ 0.4
BPTF-208ENST00000544778 PRSS42Q7Z5A4 293 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 ADAD2Q8NCV1 583 aaKnown RBP17.53■□□□□ 0.4
BPTF-208ENST00000544778 KIAA0100Q14667 2235 aaKnown RBP17.53■□□□□ 0.4
BPTF-208ENST00000544778 CD99P14209 185 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 RHBDD2Q6NTF9 364 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 PGPEP1Q9NXJ5 209 aa17.53■□□□□ 0.4
BPTF-208ENST00000544778 MMP9P14780 707 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 TMPRSS3P57727 454 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 HIST1H4GQ99525 98 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 TMEM30AQ9NV96 361 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 IGHV4-34P06331 123 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 OR10J1P30954 320 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 HCP5Q6MZN7 132 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 C19orf48Q6RUI8 117 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 WDFY1Q8IWB7 410 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 OPN3Q9H1Y3 402 aaPredicted RBP17.52■□□□□ 0.4
BPTF-208ENST00000544778 CCL27Q9Y4X3 112 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 NUDT10Q8NFP7 164 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 NUDT11Q96G61 164 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 FAM60AQ9NP50 221 aa17.52■□□□□ 0.4
BPTF-208ENST00000544778 NKX2-6A6NCS4 301 aa17.52■□□□□ 0.39
BPTF-208ENST00000544778 FAM74A4Q5TZK3 123 aa17.52■□□□□ 0.39
BPTF-208ENST00000544778 CALHM1Q8IU99 346 aa17.52■□□□□ 0.39
BPTF-208ENST00000544778 RGP1Q92546 391 aaPredicted RBP17.52■□□□□ 0.39
BPTF-208ENST00000544778 NRAPQ86VF7 1730 aa17.52■□□□□ 0.39
BPTF-208ENST00000544778 IGHV3OR16-10A0A075B7F0 116 aa17.52■□□□□ 0.39
BPTF-208ENST00000544778 PRDX2P32119 198 aa17.52■□□□□ 0.39
BPTF-208ENST00000544778 KLF9Q13886 244 aaPredicted RBP17.52■□□□□ 0.39
BPTF-208ENST00000544778 GMPPAQ96IJ6 420 aaPredicted RBP17.52■□□□□ 0.39
BPTF-208ENST00000544778 NPFFO15130 113 aa17.52■□□□□ 0.39
BPTF-208ENST00000544778 INO80CQ6PI98 192 aaPredicted RBP17.52■□□□□ 0.39
BPTF-208ENST00000544778 OR2W1Q9Y3N9 320 aa17.52■□□□□ 0.39
BPTF-208ENST00000544778 KBTBD11O94819 623 aa17.51■□□□□ 0.39
BPTF-208ENST00000544778 TMEM50BP56557 158 aa17.51■□□□□ 0.39
BPTF-208ENST00000544778 C11orf91Q3C1V1 193 aa17.51■□□□□ 0.39
BPTF-208ENST00000544778 LIPT2A6NK58 231 aa17.51■□□□□ 0.39
BPTF-208ENST00000544778 GAPDHP04406 335 aaKnown RBP17.51■□□□□ 0.39
BPTF-208ENST00000544778 RAB24Q969Q5 203 aa17.51■□□□□ 0.39
BPTF-208ENST00000544778 MRPS16Q9Y3D3 137 aaKnown RBP17.51■□□□□ 0.39
BPTF-208ENST00000544778 NAT2P11245 290 aa17.51■□□□□ 0.39
BPTF-208ENST00000544778 SF3B5Q9BWJ5 86 aaKnown RBP17.51■□□□□ 0.39
BPTF-208ENST00000544778 CHRNA10Q9GZZ6 450 aa17.51■□□□□ 0.39
BPTF-208ENST00000544778 ZNF56Q15929 161 aa17.51■□□□□ 0.39
BPTF-208ENST00000544778 UNQ5815/PRO19632Q6UWF5 114 aa17.51■□□□□ 0.39
BPTF-208ENST00000544778 C17orf47Q8NEP4 570 aa17.51■□□□□ 0.39
BPTF-208ENST00000544778 KLK15Q9H2R5 256 aa17.51■□□□□ 0.39
BPTF-208ENST00000544778 RAB9AP51151 201 aa17.5■□□□□ 0.39
BPTF-208ENST00000544778 KCNE1BA0A087WTH5 132 aa17.5■□□□□ 0.39
BPTF-208ENST00000544778 IL36RNQ9UBH0 155 aa17.5■□□□□ 0.39
BPTF-208ENST00000544778 PATE3B3GLJ2 98 aa17.5■□□□□ 0.39
BPTF-208ENST00000544778 FCGR2BP31994 310 aaPredicted RBP17.5■□□□□ 0.39
BPTF-208ENST00000544778 TEX29Q8N6K0 151 aa17.5■□□□□ 0.39
BPTF-208ENST00000544778 BEX4Q9NWD9 120 aaPredicted RBP17.5■□□□□ 0.39
BPTF-208ENST00000544778 WIPI2Q9Y4P8 454 aa17.5■□□□□ 0.39
BPTF-208ENST00000544778 GEMIN7Q9H840 131 aaKnown RBP17.5■□□□□ 0.39
BPTF-208ENST00000544778 FRRS1LQ9P0K9 344 aa17.5■□□□□ 0.39
BPTF-208ENST00000544778 RCC2Q9P258 522 aaKnown RBP17.5■□□□□ 0.39
BPTF-208ENST00000544778 ELOA3CA0A087WX78 387 aaPredicted RBP17.5■□□□□ 0.39
BPTF-208ENST00000544778 hCG_38984A0A1B0GV85 526 aa17.5■□□□□ 0.39
BPTF-208ENST00000544778 ANKRD20A5PA0PJZ0 165 aa17.5■□□□□ 0.39
BPTF-208ENST00000544778 FAM74A3Q4VXF1 159 aa17.5■□□□□ 0.39
BPTF-208ENST00000544778 OR4C13Q8NGP0 309 aa17.5■□□□□ 0.39
BPTF-208ENST00000544778 COPS9Q8WXC6 57 aa17.5■□□□□ 0.39
BPTF-208ENST00000544778 LBHQ53QV2 105 aaPredicted RBP17.49■□□□□ 0.39
BPTF-208ENST00000544778 SNRNP200O75643 2136 aaKnown RBP17.49■□□□□ 0.39
BPTF-208ENST00000544778 DIRC3C9JPN6 131 aa17.49■□□□□ 0.39
BPTF-208ENST00000544778 ZNHIT1O43257 154 aa17.49■□□□□ 0.39
BPTF-208ENST00000544778 LSM6P62312 80 aaKnown RBP17.49■□□□□ 0.39
BPTF-208ENST00000544778 NUBPLQ8TB37 319 aa17.49■□□□□ 0.39
BPTF-208ENST00000544778 PMS2CLQ68D20 193 aa17.49■□□□□ 0.39
BPTF-208ENST00000544778 TPRX1Q8N7U7 411 aa17.49■□□□□ 0.39
BPTF-208ENST00000544778 NUDT16L1Q9BRJ7 211 aaKnown RBP17.49■□□□□ 0.39
BPTF-208ENST00000544778 MRM2Q9UI43 246 aaKnown RBP17.49■□□□□ 0.39
BPTF-208ENST00000544778 EWSR1Q01844 656 aaKnown RBP eCLIP17.49■□□□□ 0.39
BPTF-208ENST00000544778 PGLYRP4Q96LB8 373 aa17.49■□□□□ 0.39
BPTF-208ENST00000544778 AQP10Q96PS8 301 aa17.49■□□□□ 0.39
BPTF-208ENST00000544778 MRPS18BQ9Y676 258 aaKnown RBP17.49■□□□□ 0.39
BPTF-208ENST00000544778 CX3CL1P78423 397 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms