RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-223	ENST00000544268	SCGB1D2	O95969	90 aa		12.83	□□□□□ -0.36
CHFR-223	ENST00000544268	OR5H8	P0DN80	308 aa		12.83	□□□□□ -0.36
CHFR-223	ENST00000544268	DLK1	P80370	383 aa		12.83	□□□□□ -0.36
CHFR-223	ENST00000544268	IAH1	Q2TAA2	248 aa	Predicted RBP	12.83	□□□□□ -0.36
CHFR-223	ENST00000544268	ERGIC1	Q969X5	290 aa		12.83	□□□□□ -0.36
CHFR-223	ENST00000544268	TMEM208	Q9BTX3	173 aa		12.83	□□□□□ -0.36
CHFR-223	ENST00000544268	OR2H1	Q9GZK4	316 aa		12.83	□□□□□ -0.36
CHFR-223	ENST00000544268	ANXA10	Q9UJ72	324 aa		12.83	□□□□□ -0.36
CHFR-223	ENST00000544268	MSRB2	Q9Y3D2	182 aa		12.83	□□□□□ -0.36
CHFR-223	ENST00000544268	ZNF850	A8MQ14	1090 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	C1QL1	O75973	258 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	SYNGR4	O95473	234 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	NRAS	P01111	189 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	PPP1CC	P36873	323 aa	Known RBP	12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	P2RY1	P47900	373 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268		Q6ZSR3	168 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	SPACA3	Q8IXA5	215 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	ZADH2	Q8N4Q0	377 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	WDYHV1	Q96HA8	205 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	TUBD1	Q9UJT1	453 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	SSUH2	Q9Y2M2	353 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	BSN	Q9UPA5	3926 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268		M0R143	59 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	IL18BP	O95998	194 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	SLC24A4	Q8NFF2	622 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	BORCS8	Q96FH0	119 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	FAM210B	Q96KR6	192 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	GPR35	Q9HC97	309 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	IL36RN	Q9UBH0	155 aa		12.82	□□□□□ -0.36
CHFR-223	ENST00000544268	IGKV3D-15	A0A087WSY6	115 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	RBFOX3	A6NFN3	312 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268		K7EM74	188 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	CST2	P09228	141 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	PIGP	P57054	158 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	IGFL3	Q6UXB1	125 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	TMEM183A	Q8IXX5	376 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	TVP23C	Q96ET8	276 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	PRRG4	Q9BZD6	226 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	C14orf166	Q9Y224	244 aa	Known RBP	12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	LSM5	Q9Y4Y9	91 aa	Known RBP	12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	HSPB6	O14558	160 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	GCG	P01275	180 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	APLNR	P35414	380 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	C1orf185	Q5T7R7	199 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	PLCXD3	Q63HM9	321 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	ZNF429	Q86V71	674 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	TUSC5	Q8IXB3	177 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	FGF23	Q9GZV9	251 aa	Predicted RBP	12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	WFDC1	Q9HC57	220 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	C1orf123	Q9NWV4	160 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	ST3GAL6	Q9Y274	331 aa		12.81	□□□□□ -0.36
CHFR-223	ENST00000544268	hCG_38984	A0A1B0GV85	526 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	IGHG3	P01860	377 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	HLA-H	P01893	362 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	OR5AC1	P0C628	307 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	METTL15P1	P0C7V9	234 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	LYZL2	Q7Z4W2	148 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	OR5L1	Q8NGL2	311 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	TAAR6	Q96RI8	345 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	MED19	A0JLT2	244 aa	Predicted RBP	12.8	□□□□□ -0.36
CHFR-223	ENST00000544268		H0YL77	283 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	XRCC2	O43543	280 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	SOX15	O60248	233 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	SRP19	P09132	144 aa	Known RBP	12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	HNF1A	P20823	631 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	RBMX	P38159	391 aa	Known RBP	12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	TDGF1P3	P51864	188 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	FAM213B	Q8TBF2	198 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	CPT1C	Q8TCG5	803 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	TMEM45B	Q96B21	275 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	CALHM2	Q9HA72	323 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	SLC7A10	Q9NS82	523 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	PIEZO1	Q92508	2521 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	SVIL	O95425	2214 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268	IGF2R	P11717	2491 aa		12.8	□□□□□ -0.36
CHFR-223	ENST00000544268		A0A1B0GV50	99 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268		K7N7A8	449 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	MRPL33	O75394	65 aa	Known RBP	12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	DFFB	O76075	338 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	AMBP	P02760	352 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	PGA5	P0DJD9	388 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	SLC35E3	Q7Z769	313 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	C1orf87	Q8N0U7	546 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	C22orf15	Q8WYQ4	148 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	SPSB1	Q96BD6	273 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	CRYM-AS1	A6NIL9	109 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268		B4DEV8	164 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268		E5RGE8	158 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	HSPA12A	O43301	675 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	MMP7	P09237	267 aa	Predicted RBP	12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	DUSP1	P28562	367 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	ASCL1	P50553	236 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	HAGH	Q16775	308 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	C4orf17	Q53FE4	359 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	SLC25A26	Q70HW3	274 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	SNX22	Q96L94	193 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	NIPSNAP3B	Q9BS92	247 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	SH3BGRL3	Q9H299	93 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	NSG2	Q9Y328	171 aa		12.79	□□□□□ -0.36
CHFR-223	ENST00000544268	ZNF705G	A8MUZ8	300 aa	Predicted RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms