RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PGA4P0DJD7 388 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 CRYBB2P43320 205 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 PDLIM4P50479 330 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 KCNMB1Q16558 191 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF788Q6ZQV5 615 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 RAB40CQ96S21 281 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 CHRDL1Q9BU40 450 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF703Q9H7S9 590 aaPredicted RBP5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 OR5H1A6NKK0 313 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 C9orf172C9J069 976 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 MGST3O14880 152 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 GNG7O60262 68 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 GYPAP02724 150 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF787Q6DD87 383 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 LINC00596Q86U02 117 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF714Q96N38 554 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 PIKFYVEQ9Y2I7 2098 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ROS1P08922 2347 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 A0A1W2PNV4 684 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 PRSS23O95084 383 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 TRAPPC2P0DI81 140 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 TRAPPC2BP0DI82 140 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 SPP1P10451 314 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 TCTAP57738 103 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 SNRPEP62304 92 aaKnown RBP5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 LHFPL4Q7Z7J7 247 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF485Q8NCK3 441 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 R3HDM4Q96D70 268 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 PRSS27Q9BQR3 290 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 NAA60Q9H7X0 242 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 GP6Q9HCN6 339 aa5.99□□□□□ -1.45
SRGAP1-206ENST00000543397 A0A1B0GVG6 124 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 IGHA1P01876 353 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 SMIM17P0DL12 118 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 RHOBP62745 196 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 SSX1Q16384 188 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 Q6ZT83 130 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 PCNPQ8WW12 178 aaKnown RBP5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 RNF122Q9H9V4 155 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 A0A0U1RQV5 110 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 A0A1W2PRX2 142 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 CNN1P51911 297 aaKnown RBP5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 CEACAM21Q3KPI0 293 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF260Q3ZCT1 412 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 MRPL37Q9BZE1 423 aaKnown RBP5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 PATZ1Q9HBE1 687 aaKnown RBP5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 A0A0A6YYJ9 748 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 TMEM229AB2RXF0 380 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 CHEK1O14757 476 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 SIVA1O15304 175 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 SOCS1O15524 211 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 DUS4LO95620 317 aaKnown RBP5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 LALBAP00709 142 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 COL10A1Q03692 680 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 ECSCRQ19T08 205 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 PIGYQ3MUY2 71 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 TEX30Q5JUR7 227 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 FNDC7Q5VTL7 733 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 LEMD1Q68G75 181 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 LINC00518Q8N0U6 118 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 OR52B4Q8NGK2 314 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 FAM57AQ8TBR7 257 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 DYNLRB2Q8TF09 96 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 CLDN14O95500 239 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 RAB5CP51148 216 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 GFRA1P56159 465 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 HLA-DRB3P79483 266 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 PLAURQ03405 335 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 LY6DQ14210 128 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 CTF1Q16619 201 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 PRR27Q6MZM9 219 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 MRPL14Q6P1L8 145 aaKnown RBP5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 MRPL52Q86TS9 123 aaKnown RBP5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 WDR31Q8NA23 367 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 TUBD1Q9UJT1 453 aa5.98□□□□□ -1.45
SRGAP1-206ENST00000543397 ESPL1Q14674 2120 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 TRAV39A0A0B4J263 110 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF727A8MUV8 499 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 NDUFB6O95139 128 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 TTRP02766 147 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 ARG1P05089 322 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 RFPL3SP0C7P2 107 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 SLC38A11Q08AI6 406 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 BAK1Q16611 211 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 TIMM23BQ5SRD1 257 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 SIGLEC15Q6ZMC9 328 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 BAP18Q8IXM2 172 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 GVQW1Q8N7I0 195 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 NECAP1Q8NC96 275 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 ZPLD1Q8TCW7 415 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 ASB13Q8WXK3 278 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 ISOC2Q96AB3 205 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 ZNF488Q96MN9 340 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 SRXN1Q9BYN0 137 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 DICER1Q9UPY3 1922 aaKnown RBP5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 H7BYZ3 331 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 ONECUT2O95948 504 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 SLC35B1P78383 322 aa5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 ZFP36L1Q07352 338 aaKnown RBP5.97□□□□□ -1.45
SRGAP1-206ENST00000543397 FUT5Q11128 374 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms