RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SEC14L6B5MCN3 397 aa13.08□□□□□ -0.31
CNOT9-208ENST00000542068 PGLYRP1O75594 196 aaPredicted RBP13.08□□□□□ -0.31
CNOT9-208ENST00000542068 ERVS71-1P61550 626 aa13.08□□□□□ -0.31
CNOT9-208ENST00000542068 SRPXP78539 464 aa13.08□□□□□ -0.31
CNOT9-208ENST00000542068 DAZAP2Q15038 168 aaPredicted RBP13.08□□□□□ -0.31
CNOT9-208ENST00000542068 OR1C1Q15619 314 aa13.08□□□□□ -0.31
CNOT9-208ENST00000542068 C1orf87Q8N0U7 546 aa13.08□□□□□ -0.31
CNOT9-208ENST00000542068 HIST3H2BBQ8N257 126 aa13.08□□□□□ -0.31
CNOT9-208ENST00000542068 COL5A1P20908 1838 aaPredicted RBP13.08□□□□□ -0.32
CNOT9-208ENST00000542068 USF3Q68DE3 2245 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 OR5H1A6NKK0 313 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 CST2P09228 141 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 LMO1P25800 156 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 PAX9P55771 341 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 UCP3P55916 312 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 TAS2R30P59541 319 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 PCBD1P61457 104 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 ZNF506Q5JVG8 444 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 C1QL4Q86Z23 238 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 GCNT2Q8N0V5 402 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 Q9N2K0 584 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 AURKAIP1Q9NWT8 199 aaPredicted RBP13.08□□□□□ -0.32
CNOT9-208ENST00000542068 OR1A1Q9P1Q5 309 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 GTF3C1Q12789 2109 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 OR6C6A6NF89 314 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 TRAPPC2LH3BP13 241 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 NTN3O00634 580 aaPredicted RBP13.08□□□□□ -0.32
CNOT9-208ENST00000542068 WDR1O75083 606 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 HSPB1P04792 205 aaKnown RBP13.08□□□□□ -0.32
CNOT9-208ENST00000542068 DEFA4P12838 97 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 ARL16Q0P5N6 197 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 CLN3Q13286 438 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 PACRGQ96M98 296 aaPredicted RBP13.08□□□□□ -0.32
CNOT9-208ENST00000542068 MTCH1Q9NZJ7 389 aa13.08□□□□□ -0.32
CNOT9-208ENST00000542068 PLP2Q04941 152 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 PLPPR1Q8TBJ4 325 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 FGF23Q9GZV9 251 aaPredicted RBP13.07□□□□□ -0.32
CNOT9-208ENST00000542068 PRDM13Q9H4Q3 707 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 B4GALT7Q9UBV7 327 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 TUSC2O75896 110 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 SELEP16581 610 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 B3GALT5-AS1P59052 145 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 ID3Q02535 119 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 RTP5Q14D33 572 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 NMSQ5H8A3 153 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.07□□□□□ -0.32
CNOT9-208ENST00000542068 KCNE4Q8WWG9 221 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 POM121Q96HA1 1249 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 C14orf144Q96I85 54 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 TMEM56Q96MV1 263 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 RNF150Q9ULK6 438 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 LAMP3Q9UQV4 416 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 TMEM56-RWDD3S4R434 201 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 UBE2L5PA0A1B0GUS4 154 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 LOC102723971A0A1B0GUV8 181 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 SMCO3A2RU48 225 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 CD300LBA8K4G0 201 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 SERPINA7P05543 415 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 PSMF1Q92530 271 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 C11orf1Q9H5F2 150 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 PSENENQ9NZ42 101 aa13.07□□□□□ -0.32
CNOT9-208ENST00000542068 A0A087X0M5 115 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 A0A1B0GX30 115 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 GATCO43716 136 aaKnown RBP13.06□□□□□ -0.32
CNOT9-208ENST00000542068 LILRA1O75019 489 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 HBE1P02100 147 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 TRA2AQ13595 282 aaKnown RBP eCLIP13.06□□□□□ -0.32
CNOT9-208ENST00000542068 SPINK9Q5DT21 86 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 FOXL2NBQ6ZUU3 175 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 MKXQ8IYA7 352 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 APH1AQ96BI3 265 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 ZNF552Q9H707 407 aaPredicted RBP13.06□□□□□ -0.32
CNOT9-208ENST00000542068 PKDREJQ9NTG1 2253 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 BTBD17A6NE02 478 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 YKT6O15498 198 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 SSPNQ14714 243 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 OR10J5Q8NHC4 309 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 RBMXL1Q96E39 390 aaKnown RBP13.06□□□□□ -0.32
CNOT9-208ENST00000542068 SF3B5Q9BWJ5 86 aaKnown RBP13.06□□□□□ -0.32
CNOT9-208ENST00000542068 RBKSQ9H477 322 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 MGAQ8IWI9 3026 aa13.06□□□□□ -0.32
CNOT9-208ENST00000542068 CLDN34H7C241 214 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 FAM90A2PQ658T7 463 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 TMEM42Q69YG0 159 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 LRP11Q86VZ4 500 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 GATAD1Q8WUU5 269 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 ABI3Q9P2A4 366 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 LNP1A1A4G5 178 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 BCL2P10415 239 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 F2RP25116 425 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 PMP22Q01453 160 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 EIF3IQ13347 325 aaKnown RBP13.05□□□□□ -0.32
CNOT9-208ENST00000542068 ZNF726P1Q15940 193 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 ASCL4Q6XD76 172 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 ZDHHC23Q8IYP9 409 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 OR2M7Q8NG81 312 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 TMEM37Q8WXS4 190 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 GUCD1Q96NT3 240 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 SMIM7Q9BQ49 75 aa13.05□□□□□ -0.32
CNOT9-208ENST00000542068 SLC25A22Q9H936 323 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms