RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 H3BQ15 152 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 M0R296 226 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 HAND1O96004 215 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 DLK1P80370 383 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 OR1L1Q8NH94 360 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 KIF26AQ9ULI4 1882 aaPredicted RBP13.84□□□□□ -0.19
VARS2-212ENST00000542001 ZGRF1Q86YA3 2104 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 KIAA1671Q9BY89 1806 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 LY86O95711 162 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 COX5AP20674 150 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 P2RY1P47900 373 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 SULT1A2P50226 295 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 RPP30P78346 268 aaKnown RBP13.84□□□□□ -0.19
VARS2-212ENST00000542001 OR5A2Q8NGI9 324 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 CCL17Q92583 94 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 NTNG2Q96CW9 530 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 CHRNA10Q9GZZ6 450 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 MPC1Q9Y5U8 109 aa13.84□□□□□ -0.19
VARS2-212ENST00000542001 A8MXK9 166 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 F2RP25116 425 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 PRR27Q6MZM9 219 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 MOGAT3Q86VF5 341 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 TPPP3Q9BW30 176 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 ACTR3CQ9C0K3 210 aaPredicted RBP13.83□□□□□ -0.2
VARS2-212ENST00000542001 FAM208BQ5VWN6 2430 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 IGLV3-12A0A075B6K2 115 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 TRAV17A0A0B4J275 112 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 ZNF320A2RRD8 509 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 OR5G3P0C626 314 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 CEACAM21Q3KPI0 293 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 TCEAL7Q9BRU2 100 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 LRFN3Q9BTN0 628 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 POMT1Q9Y6A1 747 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 TRBV23-1A0A0A0MS06 115 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 IGKV1-12A0A0C4DH73 117 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 F8VVB4 439 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 F8VWA3 439 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 J3QT63 122 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 ZNF737O75373 536 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 IGKV1D-12P01611 117 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 CELA3BP08861 270 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 TMEM11P17152 192 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 ZNF66Q6ZN08 573 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 C17orf82Q86X59 251 aaPredicted RBP13.83□□□□□ -0.2
VARS2-212ENST00000542001 LINC00518Q8N0U6 118 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 TECTBQ96PL2 329 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 TMPRSS5Q9H3S3 457 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 DLL3Q9NYJ7 618 aa13.83□□□□□ -0.2
VARS2-212ENST00000542001 ZNF17P17021 662 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 FAM209BQ5JX69 171 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 ZIC4Q8N9L1 334 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 ADAMTS17Q8TE56 1095 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 AQP10Q96PS8 301 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 RAB40CQ96S21 281 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 DOK5Q9P104 306 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 A8MXE2 369 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 SYNGR3O43761 229 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 OR2H2O95918 312 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 FGF12P61328 243 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 HLA-DRB3P79483 266 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 BAGE3Q86Y29 109 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 BAGE2Q86Y30 109 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 SNX22Q96L94 193 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.82□□□□□ -0.2
VARS2-212ENST00000542001 ATRXP46100 2492 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 H0Y8G0 127 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 EGR1P18146 543 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 ZNF343Q6P1L6 599 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 OR10G4Q8NGN3 311 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 OR10G9Q8NGN4 311 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 OR10G7Q8NGN6 311 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 LILRB1Q8NHL6 650 aaPredicted RBP13.82□□□□□ -0.2
VARS2-212ENST00000542001 UHRF2Q96PU4 802 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 TMEM222Q9H0R3 208 aa13.82□□□□□ -0.2
VARS2-212ENST00000542001 MZT1Q08AG7 82 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 FOXO1Q12778 655 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 TMEM187Q14656 261 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 C10orf128Q5T292 105 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 FAM166AQ6J272 317 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 ACSM6Q6P461 480 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 KCNIP4Q6PIL6 250 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 RND1Q92730 232 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 MOB3AQ96BX8 217 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 GPR146Q96CH1 333 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 C10orf35Q96D05 121 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 DCTN5Q9BTE1 182 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 CEP295Q9C0D2 2601 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 A0A1W2PRD5 423 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 A0A1W2PRF3 423 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 A0A1W2PRM7 423 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 LINC01387J3KSC0 135 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 SUPT4H1P63272 117 aaKnown RBP13.81□□□□□ -0.2
VARS2-212ENST00000542001 VKORC1L1Q8N0U8 176 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 RBMXL3Q8N7X1 1067 aaKnown RBP13.81□□□□□ -0.2
VARS2-212ENST00000542001 OPN3Q9H1Y3 402 aaPredicted RBP13.81□□□□□ -0.2
VARS2-212ENST00000542001 TSTD3H0UI37 97 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 CDS2O95674 445 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 RAB5AP20339 215 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 PTGDSP41222 190 aa13.81□□□□□ -0.2
VARS2-212ENST00000542001 REG1BP48304 166 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms