RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 NFYAP23511 347 aaPredicted RBP6.99□□□□□ -1.29
CHD4-208ENST00000540960 FCGR2CP31995 323 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 MPV17P39210 176 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 ZNF81P51508 661 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 RND3P61587 244 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 PPP1R1AQ13522 171 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 MSMO1Q15800 293 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 ZNF880Q6PDB4 577 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 TMEM65Q6PI78 240 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 NLRC3Q7RTR2 1065 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 LGI3Q8N145 548 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 GAPTQ8N292 157 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 ZBTB34Q8NCN2 500 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 OR2Z1Q8NG97 314 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 THAP6Q8TBB0 222 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 C10orf105Q8TEF2 133 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 CAPSLQ8WWF8 208 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 ELMOD3Q96FG2 381 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 GALNT14Q96FL9 552 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 AKR1E2Q96JD6 320 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 SPIN2AQ99865 258 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 SPIN2BQ9BPZ2 258 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 NMES1Q9C002 83 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 WDR13Q9H1Z4 485 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 CA10Q9NS85 328 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 DUX4Q9UBX2 424 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 POU2F3Q9UKI9 436 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 ELF5Q9UKW6 265 aaPredicted RBP6.99□□□□□ -1.29
CHD4-208ENST00000540960 TRAPPC2LQ9UL33 140 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 HSPB11Q9Y547 144 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 NOTCH3Q9UM47 2321 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 RYR2Q92736 4967 aa6.99□□□□□ -1.29
CHD4-208ENST00000540960 C5orf51A6NDU8 294 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 OOEPA6NGQ2 149 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 RFPL4AA6NLU0 287 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 RFPL4AL1F8VTS6 287 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 M0R233 179 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 LY6HO94772 140 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 OR2H2O95918 312 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 IFNA7P01567 189 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 CD3EP07766 207 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 CD55P08174 381 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 MUC1P15941 1255 aaPredicted RBP6.98□□□□□ -1.29
CHD4-208ENST00000540960 CXCL3P19876 107 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 PRSS12P56730 875 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 HILS1P60008 231 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 EIF5AP63241 154 aaKnown RBP6.98□□□□□ -1.29
CHD4-208ENST00000540960 HLA-DRB3P79483 266 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 SMCO1Q147U7 214 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 DMRTC1Q5HYR2 192 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 AADACL3Q5VUY0 350 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 ADAM5Q6NVV9 412 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 Q6P435 159 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 WDR82Q6UXN9 313 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 ACP7Q6ZNF0 438 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 ZNF497Q6ZNH5 498 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 WFDC8Q8IUA0 241 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 TCTEX1D1Q8N7M0 179 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 INO80EQ8NBZ0 244 aaPredicted RBP6.98□□□□□ -1.29
CHD4-208ENST00000540960 OR5T2Q8NGG2 359 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 Q8TCH9 128 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 FAM168AQ92567 244 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 TMEM246Q9BRR3 403 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 RSRP1Q9BUV0 290 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 FGF23Q9GZV9 251 aaPredicted RBP6.98□□□□□ -1.29
CHD4-208ENST00000540960 FAM234AQ9H0X4 552 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 DNTTIP1Q9H147 329 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 C5orf66Q9H5L9 145 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 METTL8Q9H825 291 aaKnown RBP6.98□□□□□ -1.29
CHD4-208ENST00000540960 TMEM165Q9HC07 324 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 RNF7Q9UBF6 113 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 DNAJB11Q9UBS4 358 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 CACFD1Q9UGQ2 172 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 ZNF230Q9UIE0 474 aaPredicted RBP6.98□□□□□ -1.29
CHD4-208ENST00000540960 WIPI2Q9Y4P8 454 aa6.98□□□□□ -1.29
CHD4-208ENST00000540960 TRAV24A0A0B4J272 114 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 OR5H14A6NHG9 310 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 CRYM-AS1A6NIL9 109 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 SRRM5B3KS81 715 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 B9A039 149 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 L7N2F9 121 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 GPR31O00270 319 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 SLC33A1O00400 549 aaPredicted RBP6.97□□□□□ -1.29
CHD4-208ENST00000540960 SDCBPO00560 298 aaPredicted RBP6.97□□□□□ -1.29
CHD4-208ENST00000540960 MGST3O14880 152 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 MLNRO43193 412 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 SPINT2O43291 252 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 HSPA12AO43301 675 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 NDUFA2O43678 99 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 LILRA1O75019 489 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 OR2F2O95006 317 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 PPYP01298 95 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 WNT2P09544 360 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 SLC25A4P12235 298 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 RPA2P15927 270 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 PRDX2P32119 198 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 DSCR9P59020 149 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 RAB14P61106 215 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 ERVS71-1P61550 626 aa6.97□□□□□ -1.29
CHD4-208ENST00000540960 TNFAIP6P98066 277 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms