RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	WDR25	Q64LD2	544 aa	Predicted RBP	4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LRP11	Q86VZ4	500 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TUSC5	Q8IXB3	177 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR5C1	Q8NGR4	320 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR2AE1	Q8NHA4	323 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	RNASE11	Q8TAA1	199 aa	Known RBP	4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TP53RK	Q96S44	253 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NUDT16L1	Q9BRJ7	211 aa	Known RBP	4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SLC2A9	Q9NRM0	540 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	B3GAT1	Q9P2W7	334 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CEP295	Q9C0D2	2601 aa		4.86	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NPIPB13	A6NJU9	1138 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SERPINE3	A8MV23	424 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NPIPB4	C9JG80	1138 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IFNL4	K9M1U5	179 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PTBP3	O95758	552 aa	Known RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HLA-H	P01893	362 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LCAT	P04180	440 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	DUSP1	P28562	367 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MAS1L	P35410	378 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FGF8	P55075	233 aa	Predicted RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MTCP1	P56278	107 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR8G1	Q15617	311 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MPV17L	Q2QL34	196 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF718	Q3SXZ3	478 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GPR157	Q5UAW9	335 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LIAT1	Q6ZQX7	453 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	DOLPP1	Q86YN1	238 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR2C3	Q8N628	320 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TIMD4	Q96H15	378 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	WFIKKN1	Q96NZ8	548 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LINC00470	Q9BZP3	86 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TUBG2	Q9NRH3	451 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		A0A0G2JMM0	328 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		A0A1W2PPB8	328 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		A0A1W2PRS3	328 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MBD3L4	A6NDZ8	208 aa	Predicted RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MBD3L3	A6NE82	208 aa	Predicted RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ANKRD30BL	A7E2S9	258 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	FOXI3	A8MTJ6	420 aa	Predicted RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	KIR3DP1	A8MWS1	328 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CD55	P08174	381 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LMO1	P25800	156 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GLIPR1	P48060	266 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IDH3G	P51553	393 aa	Predicted RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	DYNLT3	P51808	116 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SUCLG1	P53597	346 aa	Known RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ARF1	P84077	181 aa	Known RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PIGY	Q3MUY2	71 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SPIN3	Q5JUX0	258 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HIST2H3PS2	Q5TEC6	136 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LCN15	Q6UWW0	184 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	DOK3	Q7L591	496 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SLC25A31	Q9H0C2	315 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	OR6C6	A6NF89	314 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNHIT1	O43257	154 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SS18L1	O75177	396 aa	Predicted RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CLDN18	P56856	261 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	HLA-DRB3	P79483	266 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF154	Q13106	437 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	C21orf62-AS1	Q17RA5	79 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF664	Q8N3J9	261 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LFNG	Q8NES3	379 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MSI2	Q96DH6	328 aa	Known RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TAAR6	Q96RI8	345 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NCOA6	Q14686	2063 aa	Predicted RBP	4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LRP4	O75096	1905 aa		4.85	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TNRC6B	Q9UPQ9	1833 aa	Known RBP	4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	EREG	O14944	169 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TMEM50A	O95807	157 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IGHV3-9	P01782	118 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CELA3A	P09093	270 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MMP7	P09237	267 aa	Predicted RBP	4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CD200	P41217	278 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IZUMO4	Q1ZYL8	232 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		Q6ZT83	130 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	CMTM1	Q8IZ96	169 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	LGI3	Q8N145	548 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ABHD3	Q8WU67	409 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	C18orf12	Q96KH6	178 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	MRPL13	Q9BYD1	178 aa	Known RBP	4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SH2D2A	Q9NP31	389 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PNRC2	Q9NPJ4	139 aa	Known RBP	4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	GAB2	Q9UQC2	676 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783		A0A1W2PR80	420 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	AADAC	P22760	399 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NKX2-1	P43699	371 aa	Predicted RBP	4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	VAMP2	P63027	116 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	IL13RA2	Q14627	380 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TIMM23B	Q5SRD1	257 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	SLC25A24	Q6NUK1	477 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	THNSL2	Q86YJ6	484 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	TMEM252	Q8N6L7	170 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	ZNF665	Q9H7R5	613 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	BCO1	Q9HAY6	547 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	NECAP2	Q9NVZ3	263 aa		4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.84	□□□□□ -1.63
RAPGEF4-215	ENST00000540783	PINLYP	A6NC86	204 aa		4.84	□□□□□ -1.64

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