RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 OR13C8Q8NGS7 320 aa12.75□□□□□ -0.37
VAMP1-207ENST00000539047 UBALD1Q8TB05 177 aa12.75□□□□□ -0.37
VAMP1-207ENST00000539047 MARCH1Q8TCQ1 289 aa12.75□□□□□ -0.37
VAMP1-207ENST00000539047 IDI2-AS1Q9NZ38 188 aa12.75□□□□□ -0.37
VAMP1-207ENST00000539047 OR2W1Q9Y3N9 320 aa12.75□□□□□ -0.37
VAMP1-207ENST00000539047 hCG_2014768A0A024R1R8 64 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 LOC105371242A0A075B767 164 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 IGKV1-6A0A0C4DH72 117 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 C15orf65H3BRN8 121 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 F2RL2O00254 374 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 LIPFP07098 398 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 LUMP51884 338 aaPredicted RBP12.74□□□□□ -0.37
VAMP1-207ENST00000539047 UCP3P55916 312 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 RAB25P57735 213 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 LTC4SQ16873 150 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 CLEC12BQ2HXU8 276 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 METTL11BQ5VVY1 283 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 ZNF841Q6ZN19 808 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 FGFRL1Q8N441 504 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 CCDC71LQ8N9Z2 235 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 OR52M1Q8NGK5 317 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 RFESDQ8TAC1 157 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 SECTM1Q8WVN6 248 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 ZNF486Q96H40 463 aaPredicted RBP12.74□□□□□ -0.37
VAMP1-207ENST00000539047 TMPRSS13Q9BYE2 586 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 SLC5A7Q9GZV3 580 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 FXYD6Q9H0Q3 95 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 RDH8Q9NYR8 311 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 OR1A1Q9P1Q5 309 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 RPUSD1Q9UJJ7 312 aaKnown RBP12.74□□□□□ -0.37
VAMP1-207ENST00000539047 KCNS2Q9ULS6 477 aa12.74□□□□□ -0.37
VAMP1-207ENST00000539047 USF3Q68DE3 2245 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 YLPM1P49750 1951 aaKnown RBP12.73□□□□□ -0.37
VAMP1-207ENST00000539047 PPIAL4CA0A0B4J2A2 164 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 MEX3AA1L020 520 aaKnown RBP12.73□□□□□ -0.37
VAMP1-207ENST00000539047 OR5H14A6NHG9 310 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 ENSAO43768 121 aaKnown RBP12.73□□□□□ -0.37
VAMP1-207ENST00000539047 FOXH1O75593 365 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 TUSC2O75896 110 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 PPIAL4GP0DN37 164 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 NFYBP25208 207 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 KRTAP10-9P60411 292 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 UBE2MP61081 183 aaKnown RBP12.73□□□□□ -0.37
VAMP1-207ENST00000539047 ZNF273Q14593 569 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 TATDN3Q17R31 274 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 C4orf46Q504U0 113 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 AADACL3Q5VUY0 350 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 TMEM200BQ69YZ2 307 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 ZNF660Q6AZW8 331 aaPredicted RBP12.73□□□□□ -0.37
VAMP1-207ENST00000539047 CMTM1Q8IZ96 169 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 OR2AK2Q8NG84 335 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 OR10V1Q8NGI7 309 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 CLDND2Q8NHS1 167 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 C8orf46Q8TAG6 207 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 MBD6Q96DN6 1003 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 CSMD1Q96PZ7 3565 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 DCHS2Q6V1P9 2916 aa12.73□□□□□ -0.37
VAMP1-207ENST00000539047 SLC22A5O76082 557 aa12.72□□□□□ -0.37
VAMP1-207ENST00000539047 RBP4P02753 201 aa12.72□□□□□ -0.37
VAMP1-207ENST00000539047 CTSDP07339 412 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-207ENST00000539047 PPP1CCP36873 323 aaKnown RBP12.72□□□□□ -0.37
VAMP1-207ENST00000539047 RAB7AP51149 207 aa12.72□□□□□ -0.37
VAMP1-207ENST00000539047 C17orf58Q2M2W7 97 aa12.72□□□□□ -0.37
VAMP1-207ENST00000539047 PRAMEF5Q5TYX0 476 aa12.72□□□□□ -0.37
VAMP1-207ENST00000539047 FAHD2BQ6P2I3 314 aaPredicted RBP12.72□□□□□ -0.37
VAMP1-207ENST00000539047 HEPN1Q6WQI6 88 aa12.72□□□□□ -0.37
VAMP1-207ENST00000539047 OR52L2PQ8NGH6 319 aa12.72□□□□□ -0.37
VAMP1-207ENST00000539047 FAHD2AQ96GK7 314 aa12.72□□□□□ -0.37
VAMP1-207ENST00000539047 DMRTB1Q96MA1 342 aa12.72□□□□□ -0.37
VAMP1-207ENST00000539047 ONECUT1Q9UBC0 465 aa12.72□□□□□ -0.37
VAMP1-207ENST00000539047 FLVCR2Q9UPI3 526 aa12.72□□□□□ -0.37
VAMP1-207ENST00000539047 VSIG4Q9Y279 399 aa12.72□□□□□ -0.37
VAMP1-207ENST00000539047 IGHV3-43A0A0B4J1X8 118 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 PHF1O43189 567 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-207ENST00000539047 CREBL2O60519 120 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-207ENST00000539047 YPEL1O60688 119 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 CGB3P0DN86 165 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 CGB7P0DN87 165 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 IGHV3-43DP0DP04 118 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 CCL3L1P16619 93 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 ANXA7P20073 488 aaKnown RBP12.71□□□□□ -0.37
VAMP1-207ENST00000539047 OMGP23515 440 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 MECP2P51608 486 aaKnown RBP12.71□□□□□ -0.37
VAMP1-207ENST00000539047 BAMBIQ13145 260 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 GNMTQ14749 295 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 TCF23Q7RTU1 214 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 YPEL2Q96QA6 119 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 TOLLIPQ9H0E2 274 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 ALX4Q9H161 411 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-207ENST00000539047 LINC00574Q9H8X3 128 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 GFOD1Q9NXC2 390 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 GPR132Q9UNW8 380 aa12.71□□□□□ -0.37
VAMP1-207ENST00000539047 TEX13DA0A0J9YY54 714 aaPredicted RBP12.7□□□□□ -0.38
VAMP1-207ENST00000539047 A8MXK9 166 aa12.7□□□□□ -0.38
VAMP1-207ENST00000539047 VWC2LB2RUY7 222 aa12.7□□□□□ -0.38
VAMP1-207ENST00000539047 GPR31O00270 319 aa12.7□□□□□ -0.38
VAMP1-207ENST00000539047 IL5P05113 134 aa12.7□□□□□ -0.38
VAMP1-207ENST00000539047 ANXA3P12429 323 aa12.7□□□□□ -0.38
VAMP1-207ENST00000539047 AKR1C4P17516 323 aa12.7□□□□□ -0.38
VAMP1-207ENST00000539047 VAMP1P23763 118 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms