RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 NRTNQ99748 197 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 DERL1Q9BUN8 251 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 APOOQ9BUR5 198 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 GNB4Q9HAV0 340 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 PLEK2Q9NYT0 353 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 CD207Q9UJ71 328 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 IGKV1D-8A0A087WSZ0 117 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 C3orf85A0A1B0GTC6 90 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 KIAA1324LA8MWY0 1029 aaPredicted RBP7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 H0YJW9 148 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 ZNF205O95201 554 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 CA2P00918 260 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 MT-ND6P03923 174 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 UCP1P25874 307 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 ZNF133P52736 654 aaPredicted RBP7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 MLF1P58340 268 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 RAB30Q15771 203 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 ZNF141Q15928 474 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 CHRDL2Q6WN34 429 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 FAM57BQ71RH2 274 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 MRPL21Q7Z2W9 205 aaKnown RBP7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 OR10V1Q8NGI7 309 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 EAF1Q96JC9 268 aaPredicted RBP7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 ST20Q9HBF5 79 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 UBE2J1Q9Y385 318 aaPredicted RBP7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 IGLV1-36A0A0B4J1U3 117 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 A0A0G2JLL6 359 aaPredicted RBP7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 SHISA7A6NL88 538 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 F2Z2F3 143 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 TNFSF12O43508 249 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 TNFP01375 233 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 C1QTNF9P0C862 333 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 GPR1P46091 355 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 VGLL4Q14135 290 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 UFSP1Q6NVU6 142 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 COLCA1Q6ZS62 124 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 PRRT2Q7Z6L0 340 aaPredicted RBP7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 OR2AE1Q8NHA4 323 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 TMEM222Q9H0R3 208 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 PLEKHJ1Q9NW61 149 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 TAAR3PQ9P1P4 343 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 LSM7Q9UK45 103 aaKnown RBP7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 BLACEA4D250 179 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 FOXI3A8MTJ6 420 aaPredicted RBP7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 SNURFLB1AK76 121 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 DEGS1O15121 323 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 PDE6DO43924 150 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 TMEM50AO95807 157 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 RPS12P25398 132 aaKnown RBP7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 HBG1P69891 147 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 HBG2P69892 147 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 COX19Q49B96 90 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 PRAMEF5Q5TYX0 476 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 PRAMEF6Q5VXH4 476 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 CLEC7AQ9BXN2 247 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 GNB1LQ9BYB4 327 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 CENPMQ9NSP4 180 aa7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 MCTS1Q9ULC4 181 aaKnown RBP7.32□□□□□ -1.24
SRGAP1-202ENST00000537556 MPPED1O15442 326 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 ADAM20O43506 726 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 IFI6P09912 130 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 ZNF83P51522 516 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 HSD52Q0P140 79 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 PDGFRLQ15198 375 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 ZNF324BQ6AW86 544 aaPredicted RBP7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 SLC25A34Q6PIV7 304 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 UEVLDQ8IX04 471 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 OR10G8Q8NGN5 311 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 DOK4Q8TEW6 326 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 CTXND1A0A1B0GTU2 59 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 C7orf71A4D174 169 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 LRP5LA4QPB2 252 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 LINC00869P0C866 280 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 VDAC1P21796 283 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 CD52P31358 61 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 RPL27P61353 136 aaKnown RBP7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 HERV-K104P61576 105 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 RELBQ01201 579 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 FAM53BQ14153 422 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 LRRC75BQ2VPJ9 315 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 ASCL4Q6XD76 172 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 ATG4DQ86TL0 474 aaPredicted RBP7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 HAPLN4Q86UW8 402 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 SCCPDHQ8NBX0 429 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 RAB40CQ96S21 281 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 STRADBQ9C0K7 418 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 PBOV1Q9GZY1 135 aa7.31□□□□□ -1.24
SRGAP1-202ENST00000537556 GOLGA4Q13439 2230 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 J3QR89 54 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 K7EQM0 130 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 RBMXL2O75526 392 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 CRYGCP07315 174 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 CTLA4P16410 223 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 HNRNPA2B1P22626 353 aaKnown RBP7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 SRD5A2P31213 254 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 IER3P46695 156 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 GPM6AP51674 278 aa7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 CD300EQ496F6 205 aaPredicted RBP7.3□□□□□ -1.24
SRGAP1-202ENST00000537556 KIAA2026Q5HYC2 2103 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms