RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 Q3ZCU0 254 aa7.67□□□□□ -1.18
CSDE1-215ENST00000533818 ZNF439Q8NDP4 499 aa7.67□□□□□ -1.18
CSDE1-215ENST00000533818 GRPEL2Q8TAA5 225 aa7.67□□□□□ -1.18
CSDE1-215ENST00000533818 PLPPR1Q8TBJ4 325 aa7.67□□□□□ -1.18
CSDE1-215ENST00000533818 GALNT14Q96FL9 552 aa7.67□□□□□ -1.18
CSDE1-215ENST00000533818 C7orf34Q96L11 122 aa7.67□□□□□ -1.18
CSDE1-215ENST00000533818 MRPL20Q9BYC9 149 aaKnown RBP7.67□□□□□ -1.18
CSDE1-215ENST00000533818 CSTL1Q9H114 145 aa7.67□□□□□ -1.18
CSDE1-215ENST00000533818 GMPR2Q9P2T1 348 aaKnown RBP7.67□□□□□ -1.18
CSDE1-215ENST00000533818 MLXQ9UH92 298 aa7.67□□□□□ -1.18
CSDE1-215ENST00000533818 DEFB131BA0A096LNP1 70 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 TRAV24A0A0B4J272 114 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 C15orf65H3BRN8 121 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 KDM4BO94953 1096 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 NPPAP01160 153 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 ADMP35318 185 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 RIDAP52758 137 aaKnown RBP7.66□□□□□ -1.18
CSDE1-215ENST00000533818 ZNF679Q8IYX0 411 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 OR2T33Q8NG76 320 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 OR13C5Q8NGS8 318 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 RFT1Q96AA3 541 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 TMEM109Q9BVC6 243 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 CHST5Q9GZS9 411 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 CMC2Q9NRP2 79 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 OR52A1Q9UKL2 312 aa7.66□□□□□ -1.18
CSDE1-215ENST00000533818 APOL3O95236 402 aa7.65□□□□□ -1.18
CSDE1-215ENST00000533818 XGP55808 180 aa7.65□□□□□ -1.18
CSDE1-215ENST00000533818 KRTAP10-2P60368 255 aa7.65□□□□□ -1.18
CSDE1-215ENST00000533818 PAX5Q02548 391 aa7.65□□□□□ -1.18
CSDE1-215ENST00000533818 ROM1Q03395 351 aa7.65□□□□□ -1.18
CSDE1-215ENST00000533818 FXYD3Q14802 87 aa7.65□□□□□ -1.18
CSDE1-215ENST00000533818 RBPMS2Q6ZRY4 209 aaKnown RBP7.65□□□□□ -1.18
CSDE1-215ENST00000533818 UXS1Q8NBZ7 420 aa7.65□□□□□ -1.18
CSDE1-215ENST00000533818 NR1H4Q96RI1 486 aaPredicted RBP7.65□□□□□ -1.18
CSDE1-215ENST00000533818 MOB1AQ9H8S9 216 aa7.65□□□□□ -1.18
CSDE1-215ENST00000533818 RHOFQ9HBH0 211 aa7.65□□□□□ -1.18
CSDE1-215ENST00000533818 GNG12Q9UBI6 72 aa7.65□□□□□ -1.18
CSDE1-215ENST00000533818 IKZF2Q9UKS7 526 aa7.65□□□□□ -1.18
CSDE1-215ENST00000533818 TRAV25A0A0B4J276 109 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 KRTAP29-1A8MX34 341 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-215ENST00000533818 PRR32B1ATL7 298 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 SRSF10O75494 262 aaKnown RBP7.64□□□□□ -1.19
CSDE1-215ENST00000533818 HTR3BO95264 441 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 CA2P00918 260 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 CCL1P22362 96 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 OR3A3P47888 321 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 LGALS7P47929 136 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 ODF4Q2M2E3 257 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 METTL21CQ5VZV1 264 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 STEAP3Q658P3 488 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 RASSF6Q6ZTQ3 369 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 ZNF767PQ75MW2 155 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 C6orf223Q8N319 242 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 OR10V1Q8NGI7 309 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 OR5B3Q8NH48 314 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 CNIH3Q8TBE1 160 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 FAM162AQ96A26 154 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 CHRDL1Q9BU40 450 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 TTTY10Q9BZA0 68 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 YIPF3Q9GZM5 350 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 C6orf62Q9GZU0 229 aaPredicted RBP7.64□□□□□ -1.19
CSDE1-215ENST00000533818 NEK6Q9HC98 313 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 ARMC1Q9NVT9 282 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 COA4Q9NYJ1 87 aa7.64□□□□□ -1.19
CSDE1-215ENST00000533818 RPL36Q9Y3U8 105 aaKnown RBP7.64□□□□□ -1.19
CSDE1-215ENST00000533818 IGKV1-9A0A0C4DH69 117 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 MRASO14807 208 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 SYT7O43581 403 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 ORC5O43913 435 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 RBMXL2O75526 392 aaKnown RBP7.63□□□□□ -1.19
CSDE1-215ENST00000533818 OR2C1O95371 312 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 HLA-AP01891 365 aaKnown RBP7.63□□□□□ -1.19
CSDE1-215ENST00000533818 PRKACBP22694 351 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 MAP2K4P45985 399 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 KCNJ3P48549 501 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 RNF212Q495C1 297 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 BTNL8Q6UX41 500 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 OR5D18Q8NGL1 313 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 KCNG3Q8TAE7 436 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 C16orf45Q96MC5 204 aaPredicted RBP7.63□□□□□ -1.19
CSDE1-215ENST00000533818 METTL1Q9UBP6 276 aaKnown RBP7.63□□□□□ -1.19
CSDE1-215ENST00000533818 R4GMQ9 66 aa7.63□□□□□ -1.19
CSDE1-215ENST00000533818 ZNF320A2RRD8 509 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 FAM229AH3BQW9 127 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 SLC22A1O15245 554 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 S1PR2O95136 353 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 SOX14O95416 240 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 SMR3BP02814 79 aaPredicted RBP7.62□□□□□ -1.19
CSDE1-215ENST00000533818 GSTP1P09211 210 aaKnown RBP7.62□□□□□ -1.19
CSDE1-215ENST00000533818 EXOSC2Q13868 293 aaKnown RBP7.62□□□□□ -1.19
CSDE1-215ENST00000533818 MICAQ29983 383 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 ODF3L2Q3SX64 289 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 FAM131AQ6UXB0 335 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 SAXO1Q8IYX7 474 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 Q8NAQ8 132 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 CD300LFQ8TDQ1 290 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 CCDC107Q8WV48 283 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 ASB17Q8WXJ9 295 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 PP6455Q8WZ26 134 aa7.62□□□□□ -1.19
CSDE1-215ENST00000533818 GHSRQ92847 366 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms