RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 IFNL4K9M1U5 179 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 CTSDP07339 412 aaPredicted RBP15.4■□□□□ 0.06
SMPD1-208ENST00000533123 ZNF728P0DKX0 622 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 PRDX2P32119 198 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 ECI1P42126 302 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 KIR2DS4P43632 304 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 KIR2DS1Q14954 304 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 TEX36Q5VZQ5 186 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 ZNF880Q6PDB4 577 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 MOB3AQ96BX8 217 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 PPYP01298 95 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 GYPAP02724 150 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 MDH2P40926 338 aaKnown RBP15.4■□□□□ 0.06
SMPD1-208ENST00000533123 ANKRD55Q3KP44 614 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 ARPC5LQ9BPX5 153 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 RDH8Q9NYR8 311 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 KIF25Q9UIL4 384 aa15.4■□□□□ 0.06
SMPD1-208ENST00000533123 ANKRD17O75179 2603 aaKnown RBP15.4■□□□□ 0.06
SMPD1-208ENST00000533123 LGALS8O00214 317 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 MUC1P15941 1255 aaPredicted RBP15.39■□□□□ 0.05
SMPD1-208ENST00000533123 MRPS11P82912 194 aaKnown RBP15.39■□□□□ 0.05
SMPD1-208ENST00000533123 COL10A1Q03692 680 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 OPCMLQ14982 345 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 IGHV4-39P01824 125 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 PIGPP57054 158 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 HERV-K104P61576 105 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 HLA-DRB3P79483 266 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 PHLDA2Q53GA4 152 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 SHEQ5VZ18 495 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 STUMQ69YW2 141 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 UBALD1Q8TB05 177 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 KIRREL1Q96J84 757 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 TRAPPC2LQ9UL33 140 aa15.39■□□□□ 0.05
SMPD1-208ENST00000533123 TRAV38-1A0A0B4J264 116 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 DBX1A6NMT0 343 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 FAM25EA8MYX2 175 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 TK1P04183 234 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 LMO1P25800 156 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 PRR18Q8N4B5 295 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 ZNRF1Q8ND25 227 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 LHFPL5Q8TAF8 219 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 SEC22AQ96IW7 307 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 CCL13Q99616 98 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 REG4Q9BYZ8 158 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 UNC79Q9P2D8 2635 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 NAV2Q8IVL1 2488 aa15.38■□□□□ 0.05
SMPD1-208ENST00000533123 A0A1B0GW55 424 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 DUX4L2P0CJ85 424 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 DUX4L3P0CJ86 424 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 DUX4L4P0CJ87 422 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 DUX4L5P0CJ88 424 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 DUX4L6P0CJ89 424 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 DUX4L7P0CJ90 424 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 CTRB1P17538 263 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 CXCL2P19875 107 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 AVPI1Q5T686 147 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 CTRB2Q6GPI1 263 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 DUX4L9Q6RFH8 374 aaPredicted RBP15.37■□□□□ 0.05
SMPD1-208ENST00000533123 GAPTQ8N292 157 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 CHODLQ9H9P2 273 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 DUX4Q9UBX2 424 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 CSMD1Q96PZ7 3565 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 CRYM-AS1A6NIL9 109 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 OR3A1P47881 315 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 AESQ08117 197 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 ZNF525Q8N782 197 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 IL1F10Q8WWZ1 152 aa15.37■□□□□ 0.05
SMPD1-208ENST00000533123 IGKV1D-13A0A0B4J2D9 117 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 TEX13DA0A0J9YY54 714 aaPredicted RBP15.36■□□□□ 0.05
SMPD1-208ENST00000533123 PPIHO43447 177 aaKnown RBP15.36■□□□□ 0.05
SMPD1-208ENST00000533123 IGKV1-13P0DP09 117 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 SELLP14151 372 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 ABCA11PQ4W5N1 156 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 OR4A4PQ8NGN8 299 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 PDCD10Q9BUL8 212 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 SLC2A9Q9NRM0 540 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 OR1A1Q9P1Q5 309 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 MFSD2BA6NFX1 497 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 TMPRSS2O15393 492 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 ADAP1O75689 374 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 IFNA2P01563 188 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 HLA-GP17693 338 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 ZP3P21754 424 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 COQ2Q96H96 371 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 LINC00052Q96N35 136 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 SHARPINQ9H0F6 387 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 SDHAF2Q9NX18 166 aa15.36■□□□□ 0.05
SMPD1-208ENST00000533123 ITPR2Q14571 2701 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 H7C1Q1 480 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 ZNF737O75373 536 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 RGS11O94810 467 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 ATF4P18848 351 aaPredicted RBP15.35■□□□□ 0.05
SMPD1-208ENST00000533123 C4BPBP20851 252 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 ATP5J2P56134 94 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 LPCAT3Q6P1A2 487 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 LYPD2Q6UXB3 125 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 ZNF788Q6ZQV5 615 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 MOB1BQ7L9L4 216 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 SGPP2Q8IWX5 399 aa15.35■□□□□ 0.05
SMPD1-208ENST00000533123 IQCF2Q8IXL9 164 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms