RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 SCGB1D4Q6XE38 83 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 TBC1D26Q86UD7 250 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 CCDC190Q86UF4 302 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 ZNF107Q9UII5 783 aaPredicted RBP9.32□□□□□ -0.92
COLCA1-203ENST00000532918 PPIAL4CA0A0B4J2A2 164 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 TDRD15B5MCY1 1934 aaKnown RBP9.32□□□□□ -0.92
COLCA1-203ENST00000532918 FCN1O00602 326 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 SIAH2O43255 324 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 PPIAL4GP0DN37 164 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 AREGP15514 252 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 RPL30P62888 115 aaKnown RBP9.32□□□□□ -0.92
COLCA1-203ENST00000532918 DGAT2L7PQ6IED9 249 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 GLDNQ6ZMI3 551 aaPredicted RBP9.32□□□□□ -0.92
COLCA1-203ENST00000532918 Q6ZT83 130 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 FAM131CQ96AQ9 280 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 GUCD1Q96NT3 240 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 OR4C12Q96R67 309 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 PARD6GQ9BYG4 376 aaPredicted RBP9.32□□□□□ -0.92
COLCA1-203ENST00000532918 PARP11Q9NR21 331 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 FRRS1LQ9P0K9 344 aa9.32□□□□□ -0.92
COLCA1-203ENST00000532918 TMEM8BA6NDV4 472 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 FBLL1A6NHQ2 334 aaKnown RBP9.31□□□□□ -0.92
COLCA1-203ENST00000532918 HAX1O00165 279 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 PGA4P0DJD7 388 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 PF4V1P10720 104 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 RPS4Y1P22090 263 aaKnown RBP9.31□□□□□ -0.92
COLCA1-203ENST00000532918 G6PCP35575 357 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 NCMAPQ5T1S8 102 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 RPS4Y2Q8TD47 263 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 DCTN5Q9BTE1 182 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 AP5S1Q9NUS5 200 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 LIPFP07098 398 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 STAG3L3P0CL85 134 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 SMIM10L1P0DMW3 83 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 HTR1DP28221 377 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 PRSS12P56730 875 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 FOXL2P58012 376 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 IL24Q13007 206 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 EBLN2Q6P2I7 272 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 UNQ9370/PRO34162Q6UXP9 181 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 LILRB1Q8NHL6 650 aaPredicted RBP9.31□□□□□ -0.92
COLCA1-203ENST00000532918 LINC01560Q8TB33 94 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 ZPLD1Q8TCW7 415 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 SMIM10Q96HG1 83 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 GPR137Q96N19 417 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 SEC11CQ9BY50 192 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 PYCARD-AS1I3L0S3 204 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 IGF2P01344 180 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 OR5AC1P0C628 307 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 FAM209BQ5JX69 171 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 GPA33Q99795 319 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 Q9N2K0 584 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 ZMIZ1Q9ULJ6 1067 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 CORTO00230 105 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 RHBDL1O75783 438 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 CST4P01036 141 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 MPV17P39210 176 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 CDC34P49427 236 aaPredicted RBP9.31□□□□□ -0.92
COLCA1-203ENST00000532918 GUCA2BQ16661 112 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 SLC25A47Q6Q0C1 308 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 RAB24Q969Q5 203 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 STARD4Q96DR4 205 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 WSB1Q9Y6I7 421 aa9.31□□□□□ -0.92
COLCA1-203ENST00000532918 OR2T8A6NH00 312 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 SMUG1Q53HV7 270 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 C11orf87Q6NUJ2 197 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 RSG1Q9BU20 258 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 LINC00470Q9BZP3 86 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 WASHC3Q9Y3C0 194 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 HILPDAQ9Y5L2 63 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 GAGE10A6NGK3 116 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 OR4C45A6NMZ5 311 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 TMEM229AB2RXF0 380 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 SYNGR2O43760 224 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 NUDT3O95989 172 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 SULT1A1P50225 295 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 RBM11P57052 281 aaKnown RBP9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM106AQ4KMX7 169 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 BPIFA4PQ86YQ2 179 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 C1orf162Q8NEQ5 155 aaPredicted RBP9.3□□□□□ -0.92
COLCA1-203ENST00000532918 WDR89Q96FK6 387 aaPredicted RBP9.3□□□□□ -0.92
COLCA1-203ENST00000532918 KCNK17Q96T54 332 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A10PA6NDY2 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A18PA6NE21 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A16PA6NEW6 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A20PA6NIJ5 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A8PA6NJQ4 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A7PA6NKC0 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A22PA8MWA6 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A12PA8MX19 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A5PA8MXJ8 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A23PA8MXZ1 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 PTP4A3O75365 173 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 HPRT1P00492 218 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 PPYP01298 95 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A15PP0C7V4 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A13PP0C7W8 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A14PP0C7W9 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 FAM90A24PP0C7X0 464 aa9.3□□□□□ -0.92
COLCA1-203ENST00000532918 COMPP49747 757 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms