RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 ZNF273Q14593 569 aa18.12■□□□□ 0.49
PACSIN3-209ENST00000532457 LTC4SQ16873 150 aa18.12■□□□□ 0.49
PACSIN3-209ENST00000532457 CLEC2AQ6UVW9 174 aa18.12■□□□□ 0.49
PACSIN3-209ENST00000532457 TIMD4Q96H15 378 aa18.12■□□□□ 0.49
PACSIN3-209ENST00000532457 NARFLQ9H6Q4 476 aa18.12■□□□□ 0.49
PACSIN3-209ENST00000532457 RDH8Q9NYR8 311 aa18.12■□□□□ 0.49
PACSIN3-209ENST00000532457 CALYQ9NYX4 217 aa18.12■□□□□ 0.49
PACSIN3-209ENST00000532457 MALRD1Q5VYJ5 2156 aa18.11■□□□□ 0.49
PACSIN3-209ENST00000532457 PRAF2O60831 178 aa18.11■□□□□ 0.49
PACSIN3-209ENST00000532457 GNRHRP30968 328 aa18.11■□□□□ 0.49
PACSIN3-209ENST00000532457 PDLIM4P50479 330 aa18.11■□□□□ 0.49
PACSIN3-209ENST00000532457 RPL31P62899 125 aaKnown RBP18.11■□□□□ 0.49
PACSIN3-209ENST00000532457 SURF2Q15527 256 aaPredicted RBP18.11■□□□□ 0.49
PACSIN3-209ENST00000532457 TMEM155Q4W5P6 130 aa18.11■□□□□ 0.49
PACSIN3-209ENST00000532457 MUC20Q8N307 709 aaPredicted RBP18.11■□□□□ 0.49
PACSIN3-209ENST00000532457 CHAC2Q8WUX2 184 aa18.11■□□□□ 0.49
PACSIN3-209ENST00000532457 OR2W1Q9Y3N9 320 aa18.11■□□□□ 0.49
PACSIN3-209ENST00000532457 CCDC168Q8NDH2 2452 aa18.11■□□□□ 0.49
PACSIN3-209ENST00000532457 KBTBD11-OT1A0A1B0GTJ5 212 aa18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 MMP23AO75900 390 aa18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 ZBTB25P24278 435 aa18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 UCP3P55916 312 aa18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 LOXL3P58215 753 aa18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 PPP1R1AQ13522 171 aa18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 METTL11BQ5VVY1 283 aa18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 TRAT1Q6PIZ9 186 aa18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 H1FXQ92522 213 aaKnown RBP18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 CLN8Q9UBY8 286 aa18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 ZNF69Q9UC07 566 aa18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 OPN4Q9UHM6 478 aa18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 DOCK11Q5JSL3 2073 aa18.1■□□□□ 0.49
PACSIN3-209ENST00000532457 TRGV10A0A0A0MS01 117 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 FAM172BPA6NC97 362 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 HMX3A6NHT5 357 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 NDUFS8O00217 210 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 SPINT2O43291 252 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 HSPA12AO43301 675 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 DIRAS3O95661 229 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 PPP1CCP36873 323 aaKnown RBP18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 GPR6P46095 362 aaPredicted RBP18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 UBE2MP61081 183 aaKnown RBP18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 HERV-K104P61576 105 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 SUPT4H1P63272 117 aaKnown RBP18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 DHODHQ02127 395 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 C4orf46Q504U0 113 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 Q5PR19 223 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 OR10V1Q8NGI7 309 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 FAM168AQ92567 244 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 DACT3Q96B18 629 aaPredicted RBP18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 RSRP1Q9BUV0 290 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 OR2S2Q9NQN1 319 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 F2RL2O00254 374 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 CTSDP07339 412 aaPredicted RBP18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 RPS2P15880 293 aaKnown RBP18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 HTD2P86397 168 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 MEF2CQ06413 473 aaPredicted RBP18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 ZNF626Q68DY1 528 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 SECTM1Q8WVN6 248 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 SCGB3A2Q96PL1 93 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 TOLLIPQ9H0E2 274 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 LINC00574Q9H8X3 128 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 CCL28Q9NRJ3 127 aa18.09■□□□□ 0.49
PACSIN3-209ENST00000532457 AKAP9Q99996 3911 aa18.08■□□□□ 0.49
PACSIN3-209ENST00000532457 YLPM1P49750 1951 aaKnown RBP18.08■□□□□ 0.49
PACSIN3-209ENST00000532457 hADV38S2A0JD32 116 aa18.08■□□□□ 0.48
PACSIN3-209ENST00000532457 CCL3L1P16619 93 aa18.08■□□□□ 0.48
PACSIN3-209ENST00000532457 DHRS2Q13268 280 aa18.08■□□□□ 0.48
PACSIN3-209ENST00000532457 CLEC12BQ2HXU8 276 aa18.08■□□□□ 0.48
PACSIN3-209ENST00000532457 GPHA2Q96T91 129 aa18.08■□□□□ 0.48
PACSIN3-209ENST00000532457 MIOXQ9UGB7 285 aa18.08■□□□□ 0.48
PACSIN3-209ENST00000532457 ITGB1BP2Q9UKP3 347 aa18.08■□□□□ 0.48
PACSIN3-209ENST00000532457 LINC00312Q9Y6C7 94 aa18.08■□□□□ 0.48
PACSIN3-209ENST00000532457 C9orf170A2RU37 121 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 IGLV2-14P01704 120 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 ECI1P42126 302 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 RRAS2P62070 204 aaPredicted RBP18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 FCN2Q15485 313 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 PHLDA2Q53GA4 152 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 WDR25Q64LD2 544 aaPredicted RBP18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 ZNF818PQ6ZRF7 136 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 ZFAND1Q8TCF1 268 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 SLC5A7Q9GZV3 580 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 PATZ1Q9HBE1 687 aaKnown RBP18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 TEX15Q9BXT5 2789 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 SNRPGP15A8MWD9 76 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 BOLA2-SMG1P6H3BVE0 249 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 IGHV3-7P01780 117 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 C2orf68Q2NKX9 166 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 TMEM128Q5BJH2 165 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 SLC38A6Q8IZM9 456 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 ZNF431Q8TF32 576 aaPredicted RBP18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 NEIL1Q96FI4 390 aaPredicted RBP18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 PIMREGQ9BSJ6 248 aa18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 UBE2J1Q9Y385 318 aaPredicted RBP18.07■□□□□ 0.48
PACSIN3-209ENST00000532457 ARHGAP32A7KAX9 2087 aa18.06■□□□□ 0.48
PACSIN3-209ENST00000532457 ZNF729A6NN14 1252 aaPredicted RBP18.06■□□□□ 0.48
PACSIN3-209ENST00000532457 A8MV72 311 aaPredicted RBP18.06■□□□□ 0.48
PACSIN3-209ENST00000532457 F5H0A9 414 aaPredicted RBP18.06■□□□□ 0.48
PACSIN3-209ENST00000532457 HSD17B6O14756 317 aa18.06■□□□□ 0.48
PACSIN3-209ENST00000532457 OR8U9P0C7N5 309 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms