RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 MCRIP2Q9BUT9 160 aaKnown RBP17.58■□□□□ 0.4
TRAPPC4-210ENST00000531290 TMED9Q9BVK6 235 aa17.58■□□□□ 0.4
TRAPPC4-210ENST00000531290 GON7Q9BXV9 100 aa17.58■□□□□ 0.4
TRAPPC4-210ENST00000531290 ABCG5Q9H222 651 aa17.58■□□□□ 0.4
TRAPPC4-210ENST00000531290 BANF2Q9H503 90 aa17.58■□□□□ 0.4
TRAPPC4-210ENST00000531290 LIN7CQ9NUP9 197 aaKnown RBP17.58■□□□□ 0.4
TRAPPC4-210ENST00000531290 LINC01548A6NM66 108 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 K7EIL1 84 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 TXNL1O43396 289 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 CA11O75493 328 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 CRTAPO75718 401 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 MYCNOSP40205 109 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 GPR12P47775 334 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 IRF3Q14653 427 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 TEX38Q6PEX7 206 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 TRAT1Q6PIZ9 186 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 ETV3LQ6ZN32 361 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 SLC25A48Q6ZT89 311 aaKnown RBP17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 Q8N6K4 173 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 NKAIN3Q8N8D7 197 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 KLHL30-AS1Q8NEE0 82 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 OR10V1Q8NGI7 309 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 RASL11BQ9BPW5 248 aa17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 LSM2Q9Y333 95 aaKnown RBP17.57■□□□□ 0.4
TRAPPC4-210ENST00000531290 FAM90A10PA6NDY2 464 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 FAM90A7PA6NKC0 464 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 FAM90A23PA8MXZ1 464 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 SLC31A2O15432 143 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 HBZP02008 142 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 GLAP06280 429 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 MGMTP16455 207 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 FUT3P21217 361 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 HOXD3P31249 432 aaPredicted RBP17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 KRTAP10-11P60412 298 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 PNLIPRP3Q17RR3 467 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 C18orf65Q6ZTR6 163 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 ZNF695Q8IW36 515 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 Q8N9W7 124 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 TMEM104Q8NE00 496 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 OR8H1Q8NGG4 311 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 OR1L1Q8NH94 360 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 KCNIP1Q9NZI2 227 aa17.56■□□□□ 0.4
TRAPPC4-210ENST00000531290 TRAM1Q15629 374 aa17.55■□□□□ 0.4
TRAPPC4-210ENST00000531290 CT45A1Q5HYN5 189 aa17.55■□□□□ 0.4
TRAPPC4-210ENST00000531290 LIPKQ5VXJ0 399 aa17.55■□□□□ 0.4
TRAPPC4-210ENST00000531290 STEAP3Q658P3 488 aa17.55■□□□□ 0.4
TRAPPC4-210ENST00000531290 CEACAM19Q7Z692 300 aa17.55■□□□□ 0.4
TRAPPC4-210ENST00000531290 GAPTQ8N292 157 aa17.55■□□□□ 0.4
TRAPPC4-210ENST00000531290 CT45A3Q8NHU0 189 aa17.55■□□□□ 0.4
TRAPPC4-210ENST00000531290 S1PR3Q99500 378 aa17.55■□□□□ 0.4
TRAPPC4-210ENST00000531290 UQCC2Q9BRT2 126 aa17.55■□□□□ 0.4
TRAPPC4-210ENST00000531290 ISYNA1Q9NPH2 558 aa17.55■□□□□ 0.4
TRAPPC4-210ENST00000531290 PLSCR3Q9NRY6 295 aa17.55■□□□□ 0.4
TRAPPC4-210ENST00000531290 WI2-2373I1.2A0A1W2PRP0 233 aa17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 UBE2QL1A1L167 161 aa17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 ZNF736B4DX44 427 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 RRP9O43818 475 aaKnown RBP17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 RCC1P18754 421 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 PSMA1P25786 263 aaKnown RBP17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 ZNF134P52741 427 aa17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 ZNF137PP52743 207 aa17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 EGFEM1PQ0D2K5 195 aa17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 ZNF439Q8NDP4 499 aa17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 TAF9BQ9HBM6 251 aa17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 OR2S2Q9NQN1 319 aa17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 GHRLQ9UBU3 117 aa17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 RRP15Q9Y3B9 282 aaKnown RBP17.54■□□□□ 0.4
TRAPPC4-210ENST00000531290 SC5DO75845 299 aa17.53■□□□□ 0.4
TRAPPC4-210ENST00000531290 MLLT11Q13015 90 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC4-210ENST00000531290 HSD17B12Q53GQ0 312 aa17.53■□□□□ 0.4
TRAPPC4-210ENST00000531290 CXorf66Q5JRM2 361 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC4-210ENST00000531290 UNQ9370/PRO34162Q6UXP9 181 aa17.53■□□□□ 0.4
TRAPPC4-210ENST00000531290 PHYHIPQ92561 330 aa17.53■□□□□ 0.4
TRAPPC4-210ENST00000531290 TMEM203Q969S6 136 aa17.53■□□□□ 0.4
TRAPPC4-210ENST00000531290 Q96M66 194 aa17.53■□□□□ 0.4
TRAPPC4-210ENST00000531290 P2RX4Q99571 388 aa17.53■□□□□ 0.4
TRAPPC4-210ENST00000531290 MGLLQ99685 303 aa17.53■□□□□ 0.4
TRAPPC4-210ENST00000531290 CST11Q9H112 138 aa17.53■□□□□ 0.4
TRAPPC4-210ENST00000531290 SOX6P35712 828 aa17.52■□□□□ 0.4
TRAPPC4-210ENST00000531290 TPBGQ13641 420 aa17.52■□□□□ 0.4
TRAPPC4-210ENST00000531290 LYPD6Q86Y78 171 aa17.52■□□□□ 0.4
TRAPPC4-210ENST00000531290 FAM46BQ96A09 425 aa17.52■□□□□ 0.4
TRAPPC4-210ENST00000531290 ZMAT5Q9UDW3 170 aaKnown RBP17.52■□□□□ 0.4
TRAPPC4-210ENST00000531290 CCL24O00175 119 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 DENRO43583 198 aaKnown RBP17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 PDCD6O75340 191 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 RPLP1P05386 114 aaKnown RBP17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 SRMP19623 302 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 VDAC1P21796 283 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 MAP2K4P45985 399 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 F2RL1P55085 397 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 RAB25P57735 213 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 FOXE3Q13461 319 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 INSL4Q14641 139 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 MORN2Q502X0 79 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 GLT8D1Q68CQ7 371 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 SIGIRRQ6IA17 410 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 ZNF554Q86TJ5 538 aa17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 MBNL3Q9NUK0 354 aaKnown RBP17.51■□□□□ 0.39
TRAPPC4-210ENST00000531290 LANCL1O43813 399 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms