RNA–Protein interactions for RNA: ENST00000529873.5

CTNND1-221, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-221ENST00000529873 NUP37Q8NFH4 326 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 OR1L6Q8NGR2 347 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 RBM38Q9H0Z9 239 aaKnown RBP7.42□□□□□ -1.22
CTNND1-221ENST00000529873 ZNF729A6NN14 1252 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-221ENST00000529873 C16orf97H3BN30 126 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 GNG7O60262 68 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 SPINK4O60575 86 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 HPXP02790 462 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 TMEM50BP56557 158 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 NCMAPQ5T1S8 102 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 C12orf54Q6X4T0 127 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 MIXL1Q9H2W2 232 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 SLC25A10Q9UBX3 287 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-221ENST00000529873 DTX4Q9Y2E6 619 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 OR51B2Q9Y5P1 312 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 IGSF23A1L1A6 192 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 FBLL1A6NHQ2 334 aaKnown RBP7.42□□□□□ -1.22
CTNND1-221ENST00000529873 PATE3B3GLJ2 98 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 PITX3O75364 302 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 EIF3GO75821 320 aaKnown RBP eCLIP7.42□□□□□ -1.22
CTNND1-221ENST00000529873 WISP3O95389 354 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-221ENST00000529873 CAMPP49913 170 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 ERVS71-1P61550 626 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 TSPO2Q5TGU0 170 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 SLC22A18ASQ8N1D0 253 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 C10orf126Q8N4M7 172 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 FAM169BQ8N8A8 192 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 TMEM52Q8NDY8 209 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 OR1N2Q8NGR9 330 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 ZNF501Q96CX3 271 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-221ENST00000529873 LOXL4Q96JB6 756 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 LRRC3BQ96PB8 259 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 COL4A1P02462 1669 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 C11orf94C9JXX5 98 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 EWSR1Q01844 656 aaKnown RBP eCLIP7.42□□□□□ -1.22
CTNND1-221ENST00000529873 JOSD1Q15040 202 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-221ENST00000529873 BSXQ3C1V8 233 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 TMEM208Q9BTX3 173 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 LPAR5Q9H1C0 372 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 MRPS18AQ9NVS2 196 aaKnown RBP7.42□□□□□ -1.22
CTNND1-221ENST00000529873 CDC42EP3Q9UKI2 254 aa7.42□□□□□ -1.22
CTNND1-221ENST00000529873 SPAARA0A1B0GVQ0 90 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 MED19A0JLT2 244 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-221ENST00000529873 FAM157AC9JC47 383 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 MFNGO00587 321 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 CXorf1O96002 111 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 HOXD4P09016 255 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-221ENST00000529873 KLRB1Q12918 225 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 SEZ6L2Q6UXD5 910 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 TGIF2LYQ8IUE0 185 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 FAM219AQ8IW50 185 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 TMEM183AQ8IXX5 376 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 OR10G8Q8NGN5 311 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 Q8WTZ3 238 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 FAM206AQ9NX38 181 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 KLK13Q9UKR3 277 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 WIPI2Q9Y4P8 454 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 LINC00587B1AMM8 73 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 CA11O75493 328 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 ADAP1O75689 374 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 PSG2P11465 335 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 ID1P41134 155 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 RBM11P57052 281 aaKnown RBP7.41□□□□□ -1.22
CTNND1-221ENST00000529873 ZNF273Q14593 569 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 PSG5Q15238 335 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 HOGA1Q86XE5 327 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 OR4P4Q8NGL7 312 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 ABHD14AQ9BUJ0 271 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 RAB33BQ9H082 229 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 MS4A5Q9H3V2 200 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 SRD5A3Q9H8P0 318 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 MSL2Q9HCI7 577 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 UFC1Q9Y3C8 167 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 TGIF2-C20orf24A0A0A6YYL0 155 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 FAM74A7A6NL05 159 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 OR4C45A6NMZ5 311 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 SRSF10O75494 262 aaKnown RBP7.41□□□□□ -1.22
CTNND1-221ENST00000529873 FAM74A3Q4VXF1 159 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 MUC15Q8N387 334 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 PTX4Q96A99 478 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 DMRTA2Q96SC8 542 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 SBF2Q86WG5 1849 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 SYNGR1O43759 233 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 TSPAN13O95857 204 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 P01737 135 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 RPS4XP62701 263 aaKnown RBP7.41□□□□□ -1.22
CTNND1-221ENST00000529873 MRPL24Q96A35 216 aaKnown RBP7.41□□□□□ -1.22
CTNND1-221ENST00000529873 C11orf68Q9H3H3 251 aaKnown RBP7.41□□□□□ -1.22
CTNND1-221ENST00000529873 INSIG2Q9Y5U4 225 aa7.41□□□□□ -1.22
CTNND1-221ENST00000529873 CCL21O00585 134 aa7.4□□□□□ -1.22
CTNND1-221ENST00000529873 ASAH2BP0C7U1 165 aa7.4□□□□□ -1.22
CTNND1-221ENST00000529873 SPINK2P20155 84 aa7.4□□□□□ -1.22
CTNND1-221ENST00000529873 EIF4EBP2Q13542 120 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-221ENST00000529873 KRTCAP3Q53RY4 240 aa7.4□□□□□ -1.22
CTNND1-221ENST00000529873 ZNF385CQ66K41 422 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-221ENST00000529873 LIPGQ9Y5X9 500 aa7.4□□□□□ -1.22
CTNND1-221ENST00000529873 HIST1H1EP10412 219 aaKnown RBP7.4□□□□□ -1.22
CTNND1-221ENST00000529873 ERGP11308 486 aa7.4□□□□□ -1.22
CTNND1-221ENST00000529873 C16orf82Q7Z2V1 217 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms