RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 LOC390937A0A1W2PQ73 354 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 OPRK1P41145 380 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 PRRX1P54821 245 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 FAM27E3Q08E93 113 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 TMEM230Q96A57 120 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 PKIBQ9C010 78 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 DNAH12Q6ZR08 3092 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 CEP350Q5VT06 3117 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 J3QRE1 110 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 COX7A2P2O60397 106 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 REG1BP48304 166 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 UBE2G1P62253 170 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 MISP3Q96FF7 219 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 WDYHV1Q96HA8 205 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 SLC25A22Q9H936 323 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 HIF1ANQ9NWT6 349 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 CLN8Q9UBY8 286 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 MFNGO00587 321 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 FGF2P09038 288 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR4A8P0C604 315 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 HIST2H3AQ71DI3 136 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR1L1Q8NH94 360 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 TVP23CQ96ET8 276 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 SAMD10Q9BYL1 202 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 Q9N2K0 584 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 SLC25A10Q9UBX3 287 aaPredicted RBP11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 KIAA2026Q5HYC2 2103 aa11.23□□□□□ -0.61
PCDHGB1-201ENST00000523390 CDRT15L2A8MXV6 281 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 NPBWR1P48145 328 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 TMEM50BP56557 158 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 NSUN5P2Q63ZY6 315 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 ABLIM2Q6H8Q1 611 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 CALHM1Q8IU99 346 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 DTD1Q8TEA8 209 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 ZNF319Q9P2F9 582 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 HSF4Q9ULV5 492 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 ZNF716A6NP11 495 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 ZNF705FA8MVS1 300 aaPredicted RBP11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 CECR9P0C854 216 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 ZNF705DP0CH99 300 aaPredicted RBP11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 ZNF705BP0CI00 300 aaPredicted RBP11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 NAT2P11245 290 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 IL24Q13007 206 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 TGIF2LYQ8IUE0 185 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 TGIF2LXQ8IUE1 241 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 C1orf174Q8IYL3 243 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR8B3Q8NGG8 313 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 PHYHIPLQ96FC7 376 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR8B2Q96RD0 313 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 CREBBPQ92793 2442 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 MAP1LC3B2A6NCE7 125 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 MPV17P39210 176 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 BPIFB3P59826 476 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 C9orf106Q8NAJ2 232 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR10S1Q8NGN2 331 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 SFXN3Q9BWM7 321 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 MAP1LC3BQ9GZQ8 125 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 GP6Q9HCN6 339 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 OR1A1Q9P1Q5 309 aa11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 RCC2Q9P258 522 aaKnown RBP11.22□□□□□ -0.61
PCDHGB1-201ENST00000523390 C19orf67A6NJJ6 358 aa11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 P2RY1P47900 373 aa11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 P2RY4P51582 365 aa11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 FLI1Q01543 452 aaPredicted RBP11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 Q0VFX4 171 aa11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 TMEM41BQ5BJD5 291 aa11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 PLAC9Q5JTB6 97 aa11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 RSPO3Q9BXY4 272 aaPredicted RBP11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 CISD1Q9NZ45 108 aaKnown RBP11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 TIGITQ495A1 244 aa11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 ZNF385CQ66K41 422 aaPredicted RBP11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 BPIFCQ8NFQ6 507 aa11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 LPAR2Q9HBW0 351 aa11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.21□□□□□ -0.61
PCDHGB1-201ENST00000523390 TRIM77I1YAP6 450 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 CELA3BP08861 270 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 SFTA3P0C7M3 94 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 KIR2DS2P43631 304 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FOXG1P55316 489 aaPredicted RBP11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 EWSR1Q01844 656 aaKnown RBP eCLIP11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 HSD17B10Q99714 261 aaKnown RBP11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 WSB1Q9Y6I7 421 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A10PA6NDY2 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A18PA6NE21 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A16PA6NEW6 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A20PA6NIJ5 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A8PA6NJQ4 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A7PA6NKC0 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A22PA8MWA6 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A12PA8MX19 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A5PA8MXJ8 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A23PA8MXZ1 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 WNT9BO14905 357 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A15PP0C7V4 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A13PP0C7W8 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A14PP0C7W9 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FAM90A24PP0C7X0 464 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 NQO2P16083 231 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 PTGDSP41222 190 aa11.21□□□□□ -0.62
PCDHGB1-201ENST00000523390 FGF8P55075 233 aaPredicted RBP11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms