RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 SPACA1Q9HBV2 294 aa8.9□□□□□ -0.98
MRPS28-206ENST00000520946 OR2S2Q9NQN1 319 aa8.9□□□□□ -0.98
MRPS28-206ENST00000520946 ETAA1Q9NY74 926 aa8.9□□□□□ -0.98
MRPS28-206ENST00000520946 TAS2R4Q9NYW5 299 aa8.9□□□□□ -0.98
MRPS28-206ENST00000520946 STUB1Q9UNE7 303 aa8.9□□□□□ -0.98
MRPS28-206ENST00000520946 AP4S1Q9Y587 144 aa8.9□□□□□ -0.98
MRPS28-206ENST00000520946 IGHV4OR15-8A0A075B7B6 117 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 A0A087WW49 117 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 MAGEA13PA6NCF6 341 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 ARPC1BO15143 372 aaKnown RBP8.89□□□□□ -0.99
MRPS28-206ENST00000520946 HSPA12AO43301 675 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 LANCL1O43813 399 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 IGLV1-40P01703 118 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 IGHV3-11P01762 117 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 HLA-DRB1P01911 266 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 MT-ND4P03905 459 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 HSPB1P04792 205 aaKnown RBP8.89□□□□□ -0.99
MRPS28-206ENST00000520946 VEGFCP49767 419 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 KIAA0141Q14154 515 aaPredicted RBP8.89□□□□□ -0.99
MRPS28-206ENST00000520946 GPR176Q14439 515 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 SLC22A6Q4U2R8 563 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 CT45A1Q5HYN5 189 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 DDI2Q5TDH0 399 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 STEAP3Q658P3 488 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 PYHIN1Q6K0P9 492 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 GTSCR1Q86UQ5 136 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 OR51A2Q8NGJ7 313 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 OR4K15Q8NH41 348 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 CT45A3Q8NHU0 189 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 MRPS24Q96EL2 167 aaKnown RBP8.89□□□□□ -0.99
MRPS28-206ENST00000520946 TMED9Q9BVK6 235 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 TOLLIPQ9H0E2 274 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 IFT22Q9H7X7 185 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 TMEM138Q9NPI0 162 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 ZNF355PQ9NSJ1 428 aa8.89□□□□□ -0.99
MRPS28-206ENST00000520946 FOXA2Q9Y261 457 aaPredicted RBP8.89□□□□□ -0.99
MRPS28-206ENST00000520946 IGHV7-81A0A0B4J1V7 117 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 FAM90A10PA6NDY2 464 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 C12orf77C9JDV5 145 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 RGS11O94810 467 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 FADS2O95864 444 aaKnown RBP8.88□□□□□ -0.99
MRPS28-206ENST00000520946 HBZP02008 142 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 TPPP2P59282 170 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 C5orf64Q2M2E5 130 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 ZNF497Q6ZNH5 498 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 SYS1Q8N2H4 156 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 TCTEX1D1Q8N7M0 179 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 GPR148Q8TDV2 347 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 CASTOR1Q8WTX7 329 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 RBMXL1Q96E39 390 aaKnown RBP8.88□□□□□ -0.99
MRPS28-206ENST00000520946 MS4A10Q96PG2 267 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 ABHD14AQ9BUJ0 271 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 GABARAPL3Q9BY60 117 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 EDA2RQ9HAV5 297 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 ZNF581Q9P0T4 197 aa8.88□□□□□ -0.99
MRPS28-206ENST00000520946 SAC3D1A6NKF1 404 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 H0Y980 276 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 SLC25A17O43808 307 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 GSTP1P09211 210 aaKnown RBP8.87□□□□□ -0.99
MRPS28-206ENST00000520946 CNTFRP26992 372 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 BDKRB2P30411 391 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 ZNF134P52741 427 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 ZNF137PP52743 207 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 ACTBL2Q562R1 376 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 NHLRC3Q5JS37 347 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 ZNF660Q6AZW8 331 aaPredicted RBP8.87□□□□□ -0.99
MRPS28-206ENST00000520946 UNQ5815/PRO19632Q6UWF5 114 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 ASCL4Q6XD76 172 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 HAPLN4Q86UW8 402 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 MINDY2Q8NBR6 621 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 OR1L1Q8NH94 360 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 TMEM106AQ96A25 262 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 Q96MT0 163 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 MRPL20Q9BYC9 149 aaKnown RBP8.87□□□□□ -0.99
MRPS28-206ENST00000520946 ISG20L2Q9H9L3 353 aaKnown RBP8.87□□□□□ -0.99
MRPS28-206ENST00000520946 IL36GQ9NZH8 169 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 CKLFQ9UBR5 152 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 OAZ3Q9UMX2 235 aa8.87□□□□□ -0.99
MRPS28-206ENST00000520946 C13orf42A0A1B0GVH6 325 aa8.86□□□□□ -0.99
MRPS28-206ENST00000520946 H7C2Y5 167 aa8.86□□□□□ -0.99
MRPS28-206ENST00000520946 ZP3P21754 424 aa8.86□□□□□ -0.99
MRPS28-206ENST00000520946 SNRPGP62308 76 aaKnown RBP8.86□□□□□ -0.99
MRPS28-206ENST00000520946 TATDN3Q17R31 274 aa8.86□□□□□ -0.99
MRPS28-206ENST00000520946 MORN2Q502X0 79 aa8.86□□□□□ -0.99
MRPS28-206ENST00000520946 C1orf146Q5VVC0 180 aa8.86□□□□□ -0.99
MRPS28-206ENST00000520946 RAB12Q6IQ22 244 aa8.86□□□□□ -0.99
MRPS28-206ENST00000520946 PPP1R27Q86WC6 154 aa8.86□□□□□ -0.99
MRPS28-206ENST00000520946 ZNF439Q8NDP4 499 aa8.86□□□□□ -0.99
MRPS28-206ENST00000520946 LGALS12Q96DT0 336 aa8.86□□□□□ -0.99
MRPS28-206ENST00000520946 CENPNQ96H22 339 aaPredicted RBP8.86□□□□□ -0.99
MRPS28-206ENST00000520946 TAF9BQ9HBM6 251 aa8.86□□□□□ -0.99
MRPS28-206ENST00000520946 EXOGQ9Y2C4 368 aaKnown RBP8.86□□□□□ -0.99
MRPS28-206ENST00000520946 PEX16Q9Y5Y5 336 aa8.86□□□□□ -0.99
MRPS28-206ENST00000520946 A8MZ25 164 aa8.85□□□□□ -0.99
MRPS28-206ENST00000520946 J3QRE1 110 aa8.85□□□□□ -0.99
MRPS28-206ENST00000520946 CA11O75493 328 aa8.85□□□□□ -0.99
MRPS28-206ENST00000520946 TRGV3P03979 118 aa8.85□□□□□ -0.99
MRPS28-206ENST00000520946 RCC1P18754 421 aaPredicted RBP8.85□□□□□ -0.99
MRPS28-206ENST00000520946 PPP1CCP36873 323 aaKnown RBP8.85□□□□□ -0.99
MRPS28-206ENST00000520946 VHLP40337 213 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms