RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 METTL8Q9H825 291 aaKnown RBP12.52□□□□□ -0.41
LSM1-203ENST00000520755 MGAT4AQ9UM21 535 aa12.52□□□□□ -0.41
LSM1-203ENST00000520755 ANKRD20A5PA0PJZ0 165 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 RBBP9O75884 186 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 FSHBP01225 129 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 RBP4P02753 201 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 GZMHP20718 246 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 PRTN3P24158 256 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 HLA-DMAP28067 261 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 KIR2DS4P43632 304 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 IFITM3Q01628 133 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 KLRD1Q13241 179 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 KLF9Q13886 244 aaPredicted RBP12.51□□□□□ -0.41
LSM1-203ENST00000520755 KIR2DS1Q14954 304 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 GPR157Q5UAW9 335 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 C1orf122Q6ZSJ8 110 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 OR4A4PQ8NGN8 299 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 CCDC32Q9BV29 185 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 PARP12Q9H0J9 701 aaKnown RBP12.51□□□□□ -0.41
LSM1-203ENST00000520755 IDI2-AS1Q9NZ38 188 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 KCNIP1Q9NZI2 227 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 OR1A1Q9P1Q5 309 aa12.51□□□□□ -0.41
LSM1-203ENST00000520755 IGHV3-43A0A0B4J1X8 118 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 CENPVL3A0A0U1RRI6 287 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 FAM172BPA6NC97 362 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 CD3DP04234 171 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 IGHV1-8P0DP01 117 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 IGHV3-43DP0DP04 118 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 HOXB4P17483 251 aaPredicted RBP12.5□□□□□ -0.41
LSM1-203ENST00000520755 COX7A1P24310 79 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 HRH1P35367 487 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 LTC4SQ16873 150 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 RUSC1-AS1Q66K80 236 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 HCP5Q6MZN7 132 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 BRD3OSQ6XYD6 125 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 TMEM229BQ8NBD8 167 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 OR5AP2Q8NGF4 316 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 OR52L2PQ8NGH6 319 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 OR4D10Q8NGI6 311 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 C22orf15Q8WYQ4 148 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 ZNF107Q9UII5 783 aaPredicted RBP12.5□□□□□ -0.41
LSM1-203ENST00000520755 NUP50Q9UKX7 468 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 MTORP42345 2549 aa12.5□□□□□ -0.41
LSM1-203ENST00000520755 TRBV6-7A0A0A0MS04 114 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 A0A1W2PRD5 423 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 A0A1W2PRF3 423 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 A0A1W2PRM7 423 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 RNASEK-C17orf49H0YIS7 233 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 M0QYG6 137 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 SPINT2O43291 252 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 CD74P04233 296 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 FAM157CP0CG43 387 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 EPHA1P21709 976 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 FPR2P25090 351 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 HTD2P86397 168 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 NCR3LG1Q68D85 454 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 FAAP20Q6NZ36 180 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 IL1F10Q8WWZ1 152 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 TNFRSF14Q92956 283 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 TINAGL1Q9GZM7 467 aaPredicted RBP12.49□□□□□ -0.41
LSM1-203ENST00000520755 MS4A7Q9GZW8 240 aaPredicted RBP12.49□□□□□ -0.41
LSM1-203ENST00000520755 UNKLQ9H9P5 680 aaKnown RBP12.49□□□□□ -0.41
LSM1-203ENST00000520755 GFOD1Q9NXC2 390 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 ZNF69Q9UC07 566 aa12.49□□□□□ -0.41
LSM1-203ENST00000520755 IGHV1-69DA0A0B4J2H0 117 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 ZNF736B4DX44 427 aaPredicted RBP12.48□□□□□ -0.41
LSM1-203ENST00000520755 SDCBPO00560 298 aaPredicted RBP12.48□□□□□ -0.41
LSM1-203ENST00000520755 BET1O15155 118 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 UPK1BO75841 260 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 DIRAS3O95661 229 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 IGHV1-69P01742 117 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 PMP2P02689 132 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 CSF1P09603 554 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 PPP1CCP36873 323 aaKnown RBP12.48□□□□□ -0.41
LSM1-203ENST00000520755 RFX2P48378 723 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 TAS2R46P59540 309 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 TAS2R19P59542 299 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 ARPC4P59998 168 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 CDK10Q15131 360 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 TRIQKQ629K1 86 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 ZNF660Q6AZW8 331 aaPredicted RBP12.48□□□□□ -0.41
LSM1-203ENST00000520755 OVCH2Q7RTZ1 564 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 LDLRAD3Q86YD5 345 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 PNKDQ8N490 385 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 ZNF439Q8NDP4 499 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 OR10A7Q8NGE5 316 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 OR10V1Q8NGI7 309 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 OR4C16Q8NGL9 310 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 OR5H2Q8NGV7 314 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 LEAP2Q969E1 77 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 GALMQ96C23 342 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 SUCNR1Q9BXA5 334 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 HEXA-AS1Q9H8Q6 139 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 ABCB10Q9NRK6 738 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 SLC23A1Q9UHI7 598 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 JPT1Q9UK76 154 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 SESN1Q9Y6P5 492 aa12.48□□□□□ -0.41
LSM1-203ENST00000520755 A0A087X0M5 115 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 A0A1B0GX30 115 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 SLC31A2O15432 143 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms