RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 GPR87Q9BY21 358 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 TMEM14DPA8MWL7 114 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 ZNF737O75373 536 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 MBPP02686 304 aaPredicted RBP10.13□□□□□ -0.79
SYNPO-204ENST00000519664 CELA3AP09093 270 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 ACAA1P09110 424 aaPredicted RBP10.13□□□□□ -0.79
SYNPO-204ENST00000519664 FGF5P12034 268 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 PTTG1IPP53801 180 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 FDX2Q6P4F2 183 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 ZNF880Q6PDB4 577 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 GFRALQ6UXV0 394 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 TIPARPQ7Z3E1 657 aaKnown RBP10.13□□□□□ -0.79
SYNPO-204ENST00000519664 OR5A2Q8NGI9 324 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 SSMEM1Q8WWF3 244 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 C10orf35Q96D05 121 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 FAM210BQ96KR6 192 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 GFI1Q99684 422 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 RYDENQ9NUL5 291 aaKnown RBP10.13□□□□□ -0.79
SYNPO-204ENST00000519664 OR2W1Q9Y3N9 320 aa10.13□□□□□ -0.79
SYNPO-204ENST00000519664 F6UZH7 168 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 J3QRE1 110 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 M0R296 226 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 SLC36A1Q7Z2H8 476 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 OR4C5Q8NGB2 326 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 OR10G4Q8NGN3 311 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 OR10G9Q8NGN4 311 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 OR10G7Q8NGN6 311 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 IGHV3OR15-7A0A075B7D8 119 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 HAND1O96004 215 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 P2RY1P47900 373 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 VAMP3Q15836 100 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 TAAR6Q96RI8 345 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 RSG1Q9BU20 258 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 KCNIP2Q9NS61 270 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 TSC2P49815 1807 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 ZNF891A8MT65 544 aaPredicted RBP10.12□□□□□ -0.79
SYNPO-204ENST00000519664 J3QT63 122 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 IFI6P09912 130 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 OR52M1Q8NGK5 317 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 DOK5Q9P104 306 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 CHCHD2Q9Y6H1 151 aaPredicted RBP10.12□□□□□ -0.79
SYNPO-204ENST00000519664 A0A0G2JMM0 328 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 A0A1W2PPB8 328 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 A0A1W2PRS3 328 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 KIR3DP1A8MWS1 328 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 G3V3Q6 166 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 RPL36A-HNRNPH2H7BZ11 118 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 CLDN34H7C241 214 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 ERHP84090 104 aaKnown RBP10.12□□□□□ -0.79
SYNPO-204ENST00000519664 MOGAT3Q86VF5 341 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 ZNF319Q9P2F9 582 aa10.12□□□□□ -0.79
SYNPO-204ENST00000519664 TMPRSS2O15393 492 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 SIRT7Q9NRC8 400 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 ERVS71-1P61550 626 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 UBE2G1P62253 170 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 ABLIM2Q6H8Q1 611 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 MOB1BQ7L9L4 216 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 TGIF2LXQ8IUE1 241 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 TMEM252Q8N6L7 170 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 ABHD14BQ96IU4 210 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 ZDHHC11Q9H8X9 412 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 PARD6AQ9NPB6 346 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 CLN8Q9UBY8 286 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 A0A1W2PRD5 423 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 A0A1W2PRF3 423 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 A0A1W2PRM7 423 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 RRP8O43159 456 aaKnown RBP10.11□□□□□ -0.79
SYNPO-204ENST00000519664 CDS2O95674 445 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 APELAP0DMC3 54 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 CDX1P47902 265 aaPredicted RBP10.11□□□□□ -0.79
SYNPO-204ENST00000519664 CTDSP1Q9GZU7 261 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 ZNF331Q9NQX6 463 aaPredicted RBP10.11□□□□□ -0.79
SYNPO-204ENST00000519664 COA4Q9NYJ1 87 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 CUL9Q8IWT3 2517 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 SCGB2A1O75556 95 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 KLF3P57682 345 aaPredicted RBP10.11□□□□□ -0.79
SYNPO-204ENST00000519664 IL24Q13007 206 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 TMEM241Q24JQ0 296 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 RAB24Q969Q5 203 aa10.11□□□□□ -0.79
SYNPO-204ENST00000519664 PLCE1Q9P212 2302 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 FNDC1Q4ZHG4 1894 aaPredicted RBP10.1□□□□□ -0.79
SYNPO-204ENST00000519664 A0A1W2PNV4 684 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 ERVFC1-1P60608 527 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 HLA-DRB3P79483 266 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 TNFAIP6P98066 277 aaPredicted RBP10.1□□□□□ -0.79
SYNPO-204ENST00000519664 NAAAQ02083 359 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 MYPOPQ86VE0 399 aaPredicted RBP10.1□□□□□ -0.79
SYNPO-204ENST00000519664 TMEM204Q9BSN7 226 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 OR1A1Q9P1Q5 309 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 DNPH1O43598 174 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 CT45A6P0DMU7 189 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 CT45A5P0DMU8 189 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 CT45A7P0DMV0 189 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 SUCLG1P53597 346 aaKnown RBP10.1□□□□□ -0.79
SYNPO-204ENST00000519664 FAM3AP98173 230 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 CT45A1Q5HYN5 189 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 ZNF385CQ66K41 422 aaPredicted RBP10.1□□□□□ -0.79
SYNPO-204ENST00000519664 CYB5R2Q6BCY4 276 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 CT45A3Q8NHU0 189 aa10.1□□□□□ -0.79
SYNPO-204ENST00000519664 CORO2AQ92828 525 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms