RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 TMEM200BQ69YZ2 307 aa8.72□□□□□ -1.01
PABPC1-203ENST00000517921 FAM53AQ6NSI3 398 aaPredicted RBP8.72□□□□□ -1.01
PABPC1-203ENST00000517921 LDLRAD3Q86YD5 345 aa8.72□□□□□ -1.01
PABPC1-203ENST00000517921 FAM185AQ8N0U4 392 aa8.72□□□□□ -1.01
PABPC1-203ENST00000517921 ZNF565Q8N9K5 539 aa8.72□□□□□ -1.01
PABPC1-203ENST00000517921 OR52L2PQ8NGH6 319 aa8.72□□□□□ -1.01
PABPC1-203ENST00000517921 RFESDQ8TAC1 157 aa8.72□□□□□ -1.01
PABPC1-203ENST00000517921 C8orf46Q8TAG6 207 aa8.72□□□□□ -1.01
PABPC1-203ENST00000517921 GALMQ96C23 342 aa8.72□□□□□ -1.01
PABPC1-203ENST00000517921 PARP12Q9H0J9 701 aaKnown RBP8.72□□□□□ -1.01
PABPC1-203ENST00000517921 BEX4Q9NWD9 120 aaPredicted RBP8.72□□□□□ -1.01
PABPC1-203ENST00000517921 TAS2R3Q9NYW6 316 aa8.72□□□□□ -1.01
PABPC1-203ENST00000517921 ZNF69Q9UC07 566 aa8.72□□□□□ -1.01
PABPC1-203ENST00000517921 TEP1Q99973 2627 aaKnown RBP8.72□□□□□ -1.01
PABPC1-203ENST00000517921 F8P00451 2351 aa8.71□□□□□ -1.01
PABPC1-203ENST00000517921 hCG_2014768A0A024R1R8 64 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 IGHV4-30-2A0A087WSY4 118 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 IGHV3-43A0A0B4J1X8 118 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 IGKV1D-13A0A0B4J2D9 117 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 KIAA1324LA8MWY0 1029 aaPredicted RBP8.71□□□□□ -1.02
PABPC1-203ENST00000517921 C22orf46C9J442 243 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 PHF1O43189 567 aaPredicted RBP8.71□□□□□ -1.02
PABPC1-203ENST00000517921 HSPA12AO43301 675 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 RLN1P04808 185 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 IGHV3-43DP0DP04 118 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 IGKV1-13P0DP09 117 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 ANXA7P20073 488 aaKnown RBP8.71□□□□□ -1.02
PABPC1-203ENST00000517921 ZBTB25P24278 435 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 DNASE1P24855 282 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 ECI1P42126 302 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 LOXL3P58215 753 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 DSCR9P59020 149 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 FXYD4P59646 89 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 HERV-K104P61576 105 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 GNB2P62879 340 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 BAMBIQ13145 260 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 SURF2Q15527 256 aaPredicted RBP8.71□□□□□ -1.02
PABPC1-203ENST00000517921 LTC4SQ16873 150 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 TATDN3Q17R31 274 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 ESCO2Q56NI9 601 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 CLDND2Q8NHS1 167 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 TOMM40LQ969M1 308 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 ZNF714Q96N38 554 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 SSBP3Q9BWW4 388 aaPredicted RBP8.71□□□□□ -1.02
PABPC1-203ENST00000517921 BEX2Q9BXY8 128 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 GAL3ST2Q9H3Q3 398 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 C5orf66Q9H5L9 145 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 BEX1Q9HBH7 125 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 IDI2-AS1Q9NZ38 188 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 RPUSD1Q9UJJ7 312 aaKnown RBP8.71□□□□□ -1.02
PABPC1-203ENST00000517921 JPT1Q9UK76 154 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 GPR132Q9UNW8 380 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 OR2W1Q9Y3N9 320 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 OTOGQ6ZRI0 2925 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 ITPR3Q14573 2671 aa8.71□□□□□ -1.02
PABPC1-203ENST00000517921 ZANQ9Y493 2812 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 IGHV4-61A0A0C4DH41 118 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 FAM172BPA6NC97 362 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 A8MXK9 166 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 MMP23AO75900 390 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 ZNF728P0DKX0 622 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 VSIG10L2P0DP72 767 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 PGAM2P15259 253 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 OMGP23515 440 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 PPP1CCP36873 323 aaKnown RBP8.7□□□□□ -1.02
PABPC1-203ENST00000517921 CEACAM6P40199 344 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 UCP3P55916 312 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 LMO4P61968 165 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 DEFB113Q30KQ7 82 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 PRAMEF5Q5TYX0 476 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 HEPN1Q6WQI6 88 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 SPNS3Q6ZMD2 512 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 TMED4Q7Z7H5 227 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 LRRC75A-AS1Q8N1F1 130 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 LY6G5BQ8NDX9 201 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 OR10V1Q8NGI7 309 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 NINJ1Q92982 152 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 RAB39BQ96DA2 213 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 MBD6Q96DN6 1003 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 RTBDNQ9BSG5 229 aaPredicted RBP8.7□□□□□ -1.02
PABPC1-203ENST00000517921 RAB9BQ9NP90 201 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 OR2S2Q9NQN1 319 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 GFOD1Q9NXC2 390 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 RDH8Q9NYR8 311 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 ZNF221Q9UK13 617 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 ALG5Q9Y673 324 aa8.7□□□□□ -1.02
PABPC1-203ENST00000517921 C7orf66A4D0T2 115 aa8.69□□□□□ -1.02
PABPC1-203ENST00000517921 YPEL1O60688 119 aa8.69□□□□□ -1.02
PABPC1-203ENST00000517921 DHFRP00374 187 aa8.69□□□□□ -1.02
PABPC1-203ENST00000517921 IL5P05113 134 aa8.69□□□□□ -1.02
PABPC1-203ENST00000517921 CTSDP07339 412 aaPredicted RBP8.69□□□□□ -1.02
PABPC1-203ENST00000517921 PI3P19957 117 aa8.69□□□□□ -1.02
PABPC1-203ENST00000517921 CLEC12BQ2HXU8 276 aa8.69□□□□□ -1.02
PABPC1-203ENST00000517921 C11orf91Q3C1V1 193 aa8.69□□□□□ -1.02
PABPC1-203ENST00000517921 TMEM30BQ3MIR4 351 aa8.69□□□□□ -1.02
PABPC1-203ENST00000517921 UTF1Q5T230 341 aa8.69□□□□□ -1.02
PABPC1-203ENST00000517921 GLDNQ6ZMI3 551 aaPredicted RBP8.69□□□□□ -1.02
PABPC1-203ENST00000517921 SLC25A42Q86VD7 318 aa8.69□□□□□ -1.02
PABPC1-203ENST00000517921 SLC38A6Q8IZM9 456 aa8.69□□□□□ -1.02
PABPC1-203ENST00000517921 ADAD2Q8NCV1 583 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms