RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TFPI2P48307 235 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 RAB7AP51149 207 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 UBE2E1P51965 193 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 SUB1P53999 127 aaKnown RBP eCLIP2.19□□□□□ -2.06
CPNE3-204ENST00000517862 SLC25A11Q02978 314 aaKnown RBP2.19□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF92Q03936 586 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 TRAM2Q15035 370 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 MAPK14Q16539 360 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 MOGQ16653 247 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 ABCA11PQ4W5N1 156 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 HSP90AA4PQ58FG1 418 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 ULK3Q6PHR2 472 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 LYPD2Q6UXB3 125 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 CASP12Q6UXS9 341 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 GDPD3Q7L5L3 318 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 TMEM61Q8N0U2 210 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 RHOXF1Q8NHV9 184 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 RPS4Y2Q8TD47 263 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 TCP10LQ8TDR4 215 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 TMEM54Q969K7 222 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 EEF1AKMT3Q96AZ1 226 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF488Q96MN9 340 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 TBL1XR1Q9BZK7 514 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 SELENOIQ9C0D9 397 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 GAL3ST2Q9H3Q3 398 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 DPH3P1Q9H4G8 78 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 MRPL47Q9HD33 250 aaKnown RBP2.19□□□□□ -2.06
CPNE3-204ENST00000517862 ZC4H2Q9NQZ6 224 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 SDHAF3Q9NRP4 125 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 CCDC59Q9P031 241 aaKnown RBP2.19□□□□□ -2.06
CPNE3-204ENST00000517862 PAK5Q9P286 719 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 TP53TG1Q9Y2A0 90 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 RCL1Q9Y2P8 373 aaKnown RBP2.19□□□□□ -2.06
CPNE3-204ENST00000517862 RBMX2Q9Y388 322 aaKnown RBP2.19□□□□□ -2.06
CPNE3-204ENST00000517862 GOLT1BQ9Y3E0 138 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 N6AMT1Q9Y5N5 214 aa2.19□□□□□ -2.06
CPNE3-204ENST00000517862 GJE1A6NN92 205 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF726A6NNF4 738 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 CALUO43852 315 aaPredicted RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 FKBP6O75344 327 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 LYPLA1O75608 230 aaPredicted RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 FARS2O95363 451 aaKnown RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 FGFR1OPO95684 399 aaKnown RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 IGLV1-51P01701 117 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 IGHV3-23P01764 117 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 GIG44P09565 113 aaPredicted RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 KRTAP1-4P0C5Y4 121 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF35P13682 527 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 CSNK2A2P19784 350 aaPredicted RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 PMELP40967 661 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 GLP1RP43220 463 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 KIR3DL2P43630 455 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 GPR4P46093 362 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 NUTF2P61970 127 aaKnown RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 GPR176Q14439 515 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 STK38Q15208 465 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 TMED2Q15363 201 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 ZSCAN26Q16670 478 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 Q1RN00 199 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 RPEL1Q2QD12 228 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 DEFB135Q30KP9 77 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 TMEM176BQ3YBM2 270 aaPredicted RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 RNF212Q495C1 297 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 CPTPQ5TA50 214 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 TSPO2Q5TGU0 170 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 STUMQ69YW2 141 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 NPSR1Q6W5P4 371 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 HDDC2Q7Z4H3 204 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 FAM58AQ8N1B3 248 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 DRAM1Q8N682 238 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 TMEM35BQ8NCS4 154 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 OR51S1Q8NGJ8 323 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 OR1N2Q8NGR9 330 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 TYMSOSQ8TAI1 123 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 ACOT11Q8WXI4 607 aaPredicted RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 TMBIM1Q969X1 311 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 ISOC2Q96AB3 205 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 ATP6V1G3Q96LB4 118 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 OPALINQ96PE5 141 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 TSSK3Q96PN8 268 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 HIST1H4GQ99525 98 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 KIR2DL4Q99706 377 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 KCTD14Q9BQ13 255 aaPredicted RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 EBF4Q9BQW3 602 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 OR11A1Q9GZK7 315 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 POLR2J2Q9GZM3 115 aaKnown RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 POLR2J3Q9H1A7 115 aaKnown RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 TMEM38AQ9H6F2 299 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 RPF2Q9H7B2 306 aaKnown RBP2.18□□□□□ -2.06
CPNE3-204ENST00000517862 SIAEQ9HAT2 523 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 ABCB10Q9NRK6 738 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 AIG1Q9NVV5 245 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 CD274Q9NZQ7 290 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 ABCD2Q9UBJ2 740 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 Q9UF83 564 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 LGALS13Q9UHV8 139 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 ZNF229Q9UJW7 825 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 FLVCR2Q9UPI3 526 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 ST3GAL6Q9Y274 331 aa2.18□□□□□ -2.06
CPNE3-204ENST00000517862 IGKV3D-15A0A087WSY6 115 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms