RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ZNF818PQ6ZRF7 136 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 TIPARPQ7Z3E1 657 aaKnown RBP8.28□□□□□ -1.08
VCAN-210ENST00000513960 SELENOHQ8IZQ5 122 aaKnown RBP8.28□□□□□ -1.08
VCAN-210ENST00000513960 IMMP1LQ96LU5 166 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 YPEL4Q96NS1 127 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 OPN3Q9H1Y3 402 aaPredicted RBP8.28□□□□□ -1.08
VCAN-210ENST00000513960 NAGKQ9UJ70 344 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 GJE1A6NN92 205 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 TNFSF11O14788 317 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 TMEM50AO95807 157 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 UMODP07911 640 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 B4GALT1P15291 398 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 DPPA3Q6W0C5 159 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 BAGE3Q86Y29 109 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 BAGE2Q86Y30 109 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 H1FOOQ8IZA3 346 aaPredicted RBP8.28□□□□□ -1.08
VCAN-210ENST00000513960 VN1R17PQ8TDU5 208 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 RCC1LQ96I51 464 aaKnown RBP8.28□□□□□ -1.08
VCAN-210ENST00000513960 MKRN2OSH3BPM6 223 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 RRP8O43159 456 aaKnown RBP8.28□□□□□ -1.08
VCAN-210ENST00000513960 PDCD6O75340 191 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 CBR3O75828 277 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 VDAC1P21796 283 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 MDH2P40926 338 aaKnown RBP8.28□□□□□ -1.08
VCAN-210ENST00000513960 ARF1P84077 181 aaKnown RBP8.28□□□□□ -1.08
VCAN-210ENST00000513960 ZXDAP98168 799 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 C10orf128Q5T292 105 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 UBALD2Q8IYN6 164 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 OR2Y1Q8NGV0 311 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 MRPL30Q8TCC3 161 aaKnown RBP8.28□□□□□ -1.08
VCAN-210ENST00000513960 ADGRG7Q96K78 797 aa8.28□□□□□ -1.08
VCAN-210ENST00000513960 ALKBH3Q96Q83 286 aaPredicted RBP8.28□□□□□ -1.08
VCAN-210ENST00000513960 SPINK4O60575 86 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 WDR1O75083 606 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 P04436 131 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 BTF3P20290 206 aaKnown RBP8.27□□□□□ -1.09
VCAN-210ENST00000513960 CTSSP25774 331 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 CNN1P51911 297 aaKnown RBP8.27□□□□□ -1.09
VCAN-210ENST00000513960 NUBP1P53384 320 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 KRTDAPP60985 99 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 GNB2P62879 340 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 RAC1P63000 192 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 HBG1P69891 147 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 HBG2P69892 147 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 TRA2AQ13595 282 aaKnown RBP eCLIP8.27□□□□□ -1.09
VCAN-210ENST00000513960 ALKBH2Q6NS38 261 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 MAFAQ8NHW3 353 aaPredicted RBP8.27□□□□□ -1.09
VCAN-210ENST00000513960 GATAD1Q8WUU5 269 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 TMEM208Q9BTX3 173 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 ZDHHC11Q9H8X9 412 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 DOCK11Q5JSL3 2073 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 KIAA2026Q5HYC2 2103 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 ADAMTS9Q9P2N4 1935 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 A0A0U1RQV5 110 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 AQP7O14520 342 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 ZIC3O60481 467 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 TUSC2O75896 110 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 DEFA4P12838 97 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 DTYMKP23919 212 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 ERVFC1-1P60608 527 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 TGFBR3Q03167 851 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 ENDOGQ14249 297 aaKnown RBP8.27□□□□□ -1.09
VCAN-210ENST00000513960 SPINK9Q5DT21 86 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 ARSJQ5FYB0 599 aaPredicted RBP8.27□□□□□ -1.09
VCAN-210ENST00000513960 PHYHD1Q5SRE7 291 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 MCEMP1Q8IX19 187 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 TMEM54Q969K7 222 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 TMEM204Q9BSN7 226 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 TM2D1Q9BX74 207 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 CISD1Q9NZ45 108 aaKnown RBP8.27□□□□□ -1.09
VCAN-210ENST00000513960 A0A0J9YW62 118 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 SIAH2O43255 324 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 KLF7O75840 302 aaPredicted RBP8.27□□□□□ -1.09
VCAN-210ENST00000513960 GYPAP02724 150 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 PSG2P11465 335 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 CEACAM1P13688 526 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 RAB4AP20338 218 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 MAS1LP35410 378 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 NPBWR2P48146 333 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 HIST1H3AP68431 136 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 ACOT6Q3I5F7 207 aaPredicted RBP8.27□□□□□ -1.09
VCAN-210ENST00000513960 ZNF611Q8N823 705 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 BTF3L4Q96K17 158 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 CTDSP1Q9GZU7 261 aa8.27□□□□□ -1.09
VCAN-210ENST00000513960 RYDENQ9NUL5 291 aaKnown RBP8.27□□□□□ -1.09
VCAN-210ENST00000513960 A0A1B0GW64 132 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 PATE3B3GLJ2 98 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 ZNF732B4DXR9 585 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 LAMTOR5O43504 91 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 PAGE4O60829 102 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 SFTPCP11686 197 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 MRGPRGQ86SM5 289 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 TMEM256Q8N2U0 113 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 OR10V1Q8NGI7 309 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 TXN2Q99757 166 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 VAMP8Q9BV40 100 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 PARLQ9H300 379 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 C3orf80F5H4A9 247 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 CER1O95813 267 aa8.26□□□□□ -1.09
VCAN-210ENST00000513960 HRASP01112 189 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms